Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QYE82_RS01375 Genome accession   NZ_CP129374
Coordinates   318424..319089 (+) Length   221 a.a.
NCBI ID   WP_002458294.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain CSMH-411EB     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 313424..324089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE82_RS01360 - 314781..316325 (+) 1545 WP_058703137.1 NAD(P)H-binding protein -
  QYE82_RS01365 - 316448..317917 (-) 1470 WP_301560463.1 alkaline phosphatase -
  QYE82_RS01370 - 318214..318393 (+) 180 WP_301560464.1 hypothetical protein -
  QYE82_RS01375 braR 318424..319089 (+) 666 WP_002458294.1 response regulator transcription factor Regulator
  QYE82_RS01380 braS 319095..319991 (+) 897 WP_002458293.1 sensor histidine kinase Regulator
  QYE82_RS01385 - 320102..320851 (+) 750 WP_002490898.1 ABC transporter ATP-binding protein -
  QYE82_RS01390 - 320853..322865 (+) 2013 WP_123213711.1 FtsX-like permease family protein -
  QYE82_RS01395 - 322969..323559 (+) 591 WP_002458290.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25677.78 Da        Isoelectric Point: 5.1924

>NTDB_id=852909 QYE82_RS01375 WP_002458294.1 318424..319089(+) (braR) [Staphylococcus epidermidis strain CSMH-411EB]
MKIFIVEDDFVIAESLANELSKWNYEVHVIDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=852909 QYE82_RS01375 WP_002458294.1 318424..319089(+) (braR) [Staphylococcus epidermidis strain CSMH-411EB]
ATGAAGATTTTCATTGTAGAAGACGATTTCGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGATTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACATATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGCGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792