Detailed information NTG0852669

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: P3U48_RS06120
• Genome accession: NZ_CP129355
• Coordinates: 1311066..1311521 (+)
• Length: 151 a.a.
• NCBI ID: WP_320409348.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain Dog009_2
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1306066..1316521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U48_RS06085 (P3U48_06085)	-	1306184..1306447 (+)	264	WP_110148360.1	helix-turn-helix domain-containing protein	-
P3U48_RS06090 (P3U48_06090)	-	1306462..1306638 (+)	177	WP_172968882.1	hypothetical protein	-
P3U48_RS06095 (P3U48_06095)	-	1306640..1306936 (+)	297	WP_103866757.1	DUF2482 family protein	-
P3U48_RS06100 (P3U48_06100)	-	1307023..1307280 (+)	258	WP_100006936.1	DUF1108 family protein	-
P3U48_RS06105 (P3U48_06105)	-	1307296..1309248 (+)	1953	WP_275302436.1	AAA family ATPase	-
P3U48_RS12515	-	1309238..1309438 (+)	201	WP_110144873.1	helix-turn-helix domain-containing protein	-
P3U48_RS06110 (P3U48_06110)	-	1309452..1310366 (+)	915	WP_214528123.1	recombinase RecT	-
P3U48_RS06115 (P3U48_06115)	-	1310429..1311073 (+)	645	WP_214528125.1	MBL fold metallo-hydrolase	-
P3U48_RS06120 (P3U48_06120)	ssbA	1311066..1311521 (+)	456	WP_320409348.1	single-stranded DNA-binding protein	Machinery gene
P3U48_RS06125 (P3U48_06125)	-	1311536..1311943 (+)	408	WP_037542877.1	hypothetical protein	-
P3U48_RS06130 (P3U48_06130)	-	1311959..1312678 (+)	720	WP_037542879.1	hypothetical protein	-
P3U48_RS06135 (P3U48_06135)	-	1312727..1313494 (+)	768	WP_320409349.1	DnaD domain protein	-
P3U48_RS06140 (P3U48_06140)	-	1313509..1314291 (+)	783	WP_199613207.1	ATP-binding protein	-
P3U48_RS06145 (P3U48_06145)	-	1314288..1314455 (+)	168	WP_233510688.1	hypothetical protein	-
P3U48_RS06150 (P3U48_06150)	-	1314455..1314661 (+)	207	WP_015729207.1	hypothetical protein	-
P3U48_RS06155 (P3U48_06155)	-	1314811..1315062 (+)	252	WP_130922111.1	hypothetical protein	-
P3U48_RS06160 (P3U48_06160)	-	1315095..1315289 (+)	195	WP_233508801.1	SAV1978 family virulence-associated passenger protein	-
P3U48_RS06165 (P3U48_06165)	-	1315295..1315480 (+)	186	WP_103866772.1	hypothetical protein	-
P3U48_RS06170 (P3U48_06170)	-	1315477..1315827 (+)	351	WP_015978006.1	YopX family protein	-
P3U48_RS06175 (P3U48_06175)	-	1315827..1316039 (+)	213	WP_320409350.1	hypothetical protein	-

Sequence

Protein

• Length: 151 a.a.
• Molecular weight: 16719.69 Da
• Isoelectric Point: 7.7102

>NTDB_id=852669 P3U48_RS06120 WP_320409348.1 1311066..1311521(+) (ssbA) [Staphylococcus pseudintermedius strain Dog009_2]
MINRVVLVGRLTKNPELRNTQSGTSVCSFTLAVNRTFTNAQGEREADFINCIAFKKTAENIINYLSKGNLAGVDGRIQSR
SYENKKGQRVYVTEVICDSVQFLEPKNTSQKQDGIASGQYQPKANHVAATSQNPFVNINDSIDISDDDLPF

Nucleotide

• Length: 456 bp

>NTDB_id=852669 P3U48_RS06120 WP_320409348.1 1311066..1311521(+) (ssbA) [Staphylococcus pseudintermedius strain Dog009_2]
ATGATTAATAGAGTTGTACTTGTAGGTCGATTAACTAAAAATCCTGAATTAAGAAATACACAAAGCGGAACAAGTGTTTG
TAGTTTCACGCTTGCTGTAAATCGTACATTTACGAATGCGCAAGGGGAGCGTGAAGCGGATTTCATTAACTGTATTGCTT
TTAAAAAAACAGCAGAGAACATTATTAACTATTTGTCAAAAGGAAATCTTGCAGGTGTAGATGGTCGCATACAATCACGC
AGTTACGAAAACAAAAAGGGACAACGCGTATATGTTACTGAGGTTATATGTGACAGTGTTCAGTTTTTAGAACCTAAAAA
TACCAGTCAAAAACAAGACGGTATAGCATCCGGACAATATCAACCAAAAGCAAATCATGTCGCTGCTACAAGTCAAAATC
CATTTGTTAATATTAATGATTCAATTGATATTAGTGACGACGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	53.488	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	51.176	100	0.576
ssbB	Bacillus subtilis subsp. subtilis str. 168	57.522	74.834	0.43
ssbB/cilA	Streptococcus mitis NCTC 12261	40.741	89.404	0.364
ssbB/cilA	Streptococcus pneumoniae TIGR4	40.741	89.404	0.364