Detailed information NTG0852498

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QYM22_RS16415
• Genome accession: NZ_CP129342
• Coordinates: 3139796..3142168 (-)
• Length: 790 a.a.
• NCBI ID: WP_046132153.1
• Uniprot ID: A0AAE2JUU7
• Organism: Bacillus glycinifermentans strain SRCM12603
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3134796..3147168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM22_RS16380 (QYM22_16380)	-	3135928..3136656 (+)	729	WP_046132123.1	amino acid ABC transporter ATP-binding protein	-
QYM22_RS16385 (QYM22_16385)	-	3136686..3137492 (+)	807	WP_099047115.1	transporter substrate-binding domain-containing protein	-
QYM22_RS16390 (QYM22_16390)	-	3137532..3138182 (+)	651	WP_046132121.1	amino acid ABC transporter permease	-
QYM22_RS16395 (QYM22_16395)	-	3138204..3138854 (+)	651	WP_046132120.1	amino acid ABC transporter permease	-
QYM22_RS16400 (QYM22_16400)	-	3138888..3139019 (-)	132	WP_065894754.1	YrzQ family protein	-
QYM22_RS16405 (QYM22_16405)	-	3139035..3139226 (-)	192	WP_046132119.1	hypothetical protein	-
QYM22_RS16410 (QYM22_16410)	-	3139246..3139707 (-)	462	WP_046132118.1	PRC-barrel domain-containing protein	-
QYM22_RS16415 (QYM22_16415)	recD2	3139796..3142168 (-)	2373	WP_046132153.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QYM22_RS16420 (QYM22_16420)	-	3142226..3142876 (-)	651	WP_046132117.1	tetratricopeptide repeat protein	-
QYM22_RS16425 (QYM22_16425)	mnmA	3142964..3144082 (-)	1119	WP_046132116.1	tRNA 2-thiouridine(34) synthase MnmA	-
QYM22_RS16430 (QYM22_16430)	-	3144167..3145306 (-)	1140	WP_046132115.1	cysteine desulfurase family protein	-
QYM22_RS16435 (QYM22_16435)	-	3145326..3145742 (-)	417	WP_046132114.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 88964.40 Da
• Isoelectric Point: 4.9625

>NTDB_id=852498 QYM22_RS16415 WP_046132153.1 3139796..3142168(-) (recD2) [Bacillus glycinifermentans strain SRCM12603]
MRMDEASFLKGTVTTVIYHNETNLYTVLKVKVQETSESFDEKTVSVTGYFPAIFEDETYTFYGKTASHPKFGLQFQTDHF
KKEVPTTKEGVIQYLSSDLFEGIGKKTAEEIVNKLGEGAINKILGDASVLYDVPKLSKKKADKLAAALQQHQGLEQIMIS
LSEFGFGPQLSMKIYQAYESETLDKIRENPYQLVKDVEGIGFVKADELGGRMGISGRHPERVKAAILFTIEAACLQEGHT
YIETKQLIIETQKLLNQSPGEEKVTEMDVADSIISLGEQKELFIEDDRCYYPSLYYAEQSFAKRVLTIAEQTEYDDQFPE
SEFLLALGELEERMQVQYAPSQKEAIQKALMSPMLLLTGGPGTGKTTVIRGIVELYSELHGLSLNPADYKKDEAFPFVLA
APTGRAAKRMSESTGLPAVTIHRLLGWNGSEGFTHDEDNPIEGRLVIIDETSMLDIWLANQLFKAIPNRIQVIMVGDEDQ
LPSVGPGQVLRDLLASNVIPSVRLTDIYRQAEGSSIVELAHDMKKGRLPQNLTAPTKDRSFIRCRQQQMKEVVEKVVQNA
LQKGYSARDIQVLAPMYRGPAGINELNVLLQNILNPPKQKGRELKYGDVVYRTGDKVLQLVNQPEHNVFNGDMGEIVSIF
YAKENTEKEDMAVVSFDGNEITFTKKDFNQFTHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITRSKKFLIL
CGEEEALEWGIKNKDSSERQTSLKRRLQQAAHEEDEELAALQKELPFSIYDANIGMEGITPFDFMEKEAE

Nucleotide

• Length: 2373 bp

>NTDB_id=852498 QYM22_RS16415 WP_046132153.1 3139796..3142168(-) (recD2) [Bacillus glycinifermentans strain SRCM12603]
ATGCGAATGGATGAGGCGTCCTTTCTGAAGGGAACGGTAACAACTGTCATCTATCACAACGAAACAAATCTCTATACCGT
GCTGAAAGTAAAAGTCCAGGAAACATCTGAATCGTTTGATGAGAAAACCGTTTCCGTCACAGGTTATTTTCCGGCGATCT
TTGAAGATGAAACGTATACGTTTTACGGAAAAACCGCCTCCCATCCGAAGTTCGGCCTCCAATTTCAGACGGATCATTTT
AAAAAAGAAGTCCCCACGACAAAAGAGGGCGTCATTCAATATTTGTCGAGCGACTTGTTTGAAGGCATCGGCAAAAAAAC
GGCAGAAGAAATCGTCAATAAGCTCGGGGAAGGCGCGATCAACAAAATTCTGGGCGACGCTTCAGTGCTTTACGACGTCC
CGAAGCTGTCAAAGAAAAAAGCGGATAAGCTTGCCGCCGCGCTTCAGCAGCACCAGGGGCTCGAGCAGATCATGATTTCG
TTAAGCGAGTTCGGTTTTGGACCCCAGCTTTCGATGAAAATTTATCAGGCATATGAATCGGAAACGCTTGATAAAATCCG
CGAAAATCCGTACCAGCTCGTGAAGGACGTCGAAGGGATCGGCTTTGTGAAAGCGGATGAACTGGGCGGCCGAATGGGGA
TTTCGGGCAGGCATCCAGAACGGGTCAAAGCGGCGATTTTATTTACGATCGAAGCGGCATGCCTGCAGGAAGGGCATACT
TACATCGAGACAAAACAGCTCATCATCGAGACGCAAAAGCTGCTGAACCAGTCGCCAGGCGAAGAAAAGGTGACCGAAAT
GGATGTGGCGGATTCGATCATTTCGCTCGGCGAACAAAAGGAATTGTTCATAGAAGATGACAGGTGCTACTATCCTTCGC
TTTACTATGCTGAACAAAGCTTTGCCAAAAGGGTGCTGACGATCGCGGAACAAACCGAATATGACGATCAGTTCCCCGAA
TCGGAATTTTTGCTTGCTTTAGGGGAGCTTGAGGAACGGATGCAGGTTCAGTACGCGCCAAGCCAAAAAGAAGCGATTCA
AAAAGCGCTGATGTCTCCGATGCTCCTTTTAACCGGAGGACCGGGGACTGGGAAAACGACGGTCATCAGGGGAATTGTCG
AATTGTACAGCGAGCTTCACGGTTTGAGCTTGAATCCGGCTGATTATAAAAAAGACGAGGCGTTTCCGTTTGTCCTGGCT
GCGCCGACAGGCAGAGCGGCCAAACGGATGAGCGAGTCGACGGGGCTTCCGGCCGTGACGATTCACAGGCTCCTCGGCTG
GAACGGTTCTGAAGGGTTTACACATGACGAGGACAACCCGATCGAAGGCCGGCTGGTAATTATCGACGAGACGAGCATGC
TCGATATATGGCTTGCCAATCAATTGTTCAAAGCGATACCCAACCGGATACAGGTCATCATGGTCGGAGACGAAGATCAG
CTTCCGTCCGTCGGACCGGGACAGGTGCTCAGGGATCTTTTAGCCTCGAACGTCATTCCTTCCGTCAGATTAACCGATAT
CTACCGGCAGGCTGAAGGTTCATCAATCGTGGAACTTGCGCATGATATGAAAAAGGGCCGGCTGCCGCAAAATTTGACAG
CGCCGACAAAGGACCGGTCATTTATCAGGTGCCGTCAGCAGCAAATGAAAGAGGTCGTGGAAAAAGTCGTCCAAAACGCA
TTGCAAAAAGGGTATTCCGCACGGGACATCCAAGTGCTCGCTCCGATGTACAGAGGACCGGCGGGAATCAATGAATTAAA
CGTGCTTTTGCAAAACATCCTCAATCCGCCGAAGCAAAAAGGCAGGGAATTGAAGTACGGGGATGTCGTCTACAGGACGG
GAGATAAAGTTCTTCAGCTCGTCAACCAGCCGGAGCACAATGTGTTTAACGGAGATATGGGAGAAATCGTCTCCATCTTT
TATGCGAAGGAAAATACGGAAAAAGAAGACATGGCCGTCGTCTCTTTCGACGGCAACGAGATCACATTCACCAAAAAGGA
TTTTAATCAGTTTACGCATGCTTACTGCTGTTCGATTCATAAATCGCAGGGCAGCGAATTTCCGATCGTCATCCTTCCCG
TCGTCAAAAGCTATTACCGGATGCTGAGAAGAAATCTGCTTTATACGGCAATTACAAGAAGCAAAAAATTTCTCATTTTG
TGCGGCGAAGAGGAAGCGCTCGAATGGGGCATCAAAAACAAAGATTCCTCTGAAAGGCAGACTTCGCTCAAGAGAAGGCT
TCAGCAGGCAGCGCATGAAGAAGACGAAGAGCTCGCCGCGCTCCAAAAGGAGCTGCCGTTTAGCATATATGACGCCAATA
TCGGCATGGAGGGCATTACACCGTTTGACTTTATGGAAAAAGAGGCGGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (151-241)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-654)

• AAA domain (AAA_30) (338-546)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	82.51	99.873	0.824