Detailed information NTG0852497

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: QYM22_RS15525
• Genome accession: NZ_CP129342
• Coordinates: 2964176..2964799 (-)
• Length: 207 a.a.
• NCBI ID: WP_231947363.1
• Uniprot ID: -
• Organism: Bacillus glycinifermentans strain SRCM12603
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2959176..2969799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM22_RS15500 (QYM22_15500)	rpsT	2959376..2959642 (+)	267	WP_046131769.1	30S ribosomal protein S20	-
QYM22_RS15505 (QYM22_15505)	holA	2959712..2960740 (-)	1029	WP_164918190.1	DNA polymerase III subunit delta	-
QYM22_RS15510 (QYM22_15510)	-	2960970..2961101 (+)	132	WP_046131767.1	YqzM family protein	-
QYM22_RS15515 (QYM22_15515)	comEC	2961204..2963531 (-)	2328	WP_046131766.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QYM22_RS15520 (QYM22_15520)	-	2963538..2964107 (-)	570	WP_046131765.1	ComE operon protein 2	-
QYM22_RS15525 (QYM22_15525)	comEA	2964176..2964799 (-)	624	WP_231947363.1	helix-hairpin-helix domain-containing protein	Machinery gene
QYM22_RS15530 (QYM22_15530)	comER	2964881..2965702 (+)	822	WP_046131763.1	late competence protein ComER	-
QYM22_RS15535 (QYM22_15535)	-	2965770..2966525 (-)	756	WP_046131762.1	class I SAM-dependent methyltransferase	-
QYM22_RS15540 (QYM22_15540)	rsfS	2966525..2966878 (-)	354	WP_046131761.1	ribosome silencing factor	-
QYM22_RS15545 (QYM22_15545)	yqeK	2966892..2967455 (-)	564	WP_046131760.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
QYM22_RS15550 (QYM22_15550)	-	2967445..2968014 (-)	570	WP_046131759.1	nicotinate-nucleotide adenylyltransferase	-
QYM22_RS15555 (QYM22_15555)	yhbY	2968033..2968323 (-)	291	WP_046131758.1	ribosome assembly RNA-binding protein YhbY	-
QYM22_RS15560 (QYM22_15560)	aroE	2968317..2969150 (-)	834	WP_046131757.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 21573.42 Da
• Isoelectric Point: 5.8770

>NTDB_id=852497 QYM22_RS15525 WP_231947363.1 2964176..2964799(-) (comEA) [Bacillus glycinifermentans strain SRCM12603]
MMNRLKRYKWPAAGGILAALFIIAVAVMSNIRSEPAGSNAVPAEAAASSSGRAAKKETKENDEIVIDLKGAVKKPGVYEM
KAGERVHHLLKKAGGTVKNAEEKQVNLAAVLQDGMVIYIPYEGEEGVQTGAGGGSSSTAGGEAETVNINTASSEELQAIP
GVGPSKAEAIAAYREENGPFQTVEDITNVSGIGEKTFEKIKSSISVK

Nucleotide

• Length: 624 bp

>NTDB_id=852497 QYM22_RS15525 WP_231947363.1 2964176..2964799(-) (comEA) [Bacillus glycinifermentans strain SRCM12603]
TTGATGAACAGGCTGAAGCGCTACAAATGGCCAGCGGCCGGAGGGATACTTGCAGCACTTTTTATCATCGCAGTCGCTGT
GATGTCAAACATACGCAGCGAACCAGCCGGGAGCAATGCTGTGCCGGCAGAGGCCGCCGCTTCTTCATCCGGCCGTGCTG
CCAAAAAGGAAACGAAAGAAAACGACGAAATTGTGATCGATCTGAAGGGCGCCGTCAAAAAGCCCGGCGTTTATGAGATG
AAGGCGGGCGAGAGGGTGCATCATTTGCTGAAAAAGGCGGGAGGTACCGTGAAAAATGCAGAAGAGAAACAAGTCAACCT
GGCCGCTGTCCTTCAGGATGGGATGGTGATTTATATTCCGTATGAAGGCGAGGAAGGCGTTCAAACCGGTGCGGGAGGAG
GATCATCATCGACAGCGGGAGGCGAAGCAGAAACGGTTAACATTAATACCGCTTCATCGGAAGAGCTTCAGGCGATCCCG
GGCGTCGGACCTTCAAAAGCGGAAGCGATCGCAGCATACCGTGAGGAGAACGGTCCGTTTCAAACGGTGGAAGACATTAC
AAATGTTTCAGGCATCGGAGAAAAAACATTTGAAAAAATAAAATCGTCAATATCAGTGAAGTAA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (66-120)

• Helix-hairpin-helix motif (HHH_3) (143-204)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	53.883	99.517	0.536
comEA	Latilactobacillus sakei subsp. sakei 23K	35.776	100	0.401
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	36.239	100	0.382
comEA/celA/cilE	Streptococcus pneumoniae D39	35.78	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.78	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae R6	35.78	100	0.377
comEA	Lactococcus lactis subsp. cremoris KW2	34.884	100	0.362