Detailed information NTG0852260

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QYR55_RS04720
• Genome accession: NZ_CP129328
• Coordinates: 955126..955971 (+)
• Length: 281 a.a.
• NCBI ID: WP_003099573.1
• Uniprot ID: A0A1J0MYY1
• Organism: Streptococcus iniae strain Si 1-19
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 950126..960971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYR55_RS04695 (QYR55_04695)	-	950248..951570 (+)	1323	WP_367562751.1	PTS sugar transporter subunit IIC	-
QYR55_RS04700 (QYR55_04700)	-	951567..952406 (+)	840	WP_003099563.1	alpha/beta hydrolase	-
QYR55_RS04705 (QYR55_04705)	ylqF	952876..953730 (+)	855	WP_367562040.1	ribosome biogenesis GTPase YlqF	-
QYR55_RS04710 (QYR55_04710)	-	953714..954499 (+)	786	WP_367562041.1	ribonuclease HII	-
QYR55_RS04715 (QYR55_04715)	-	954512..955060 (+)	549	WP_003099570.1	sugar O-acetyltransferase	-
QYR55_RS04720 (QYR55_04720)	dprA	955126..955971 (+)	846	WP_003099573.1	DNA-processing protein DprA	Machinery gene
QYR55_RS04725 (QYR55_04725)	topA	956068..958205 (+)	2138	Protein_867	type I DNA topoisomerase	-
QYR55_RS04730 (QYR55_04730)	-	958299..959183 (-)	885	WP_367562752.1	LysR family transcriptional regulator	-
QYR55_RS04735 (QYR55_04735)	-	959349..960408 (+)	1060	Protein_869	PTS transporter subunit IIC	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31550.74 Da
• Isoelectric Point: 9.9826

>NTDB_id=852260 QYR55_RS04720 WP_003099573.1 955126..955971(+) (dprA) [Streptococcus iniae strain Si 1-19]
MNNFELYKLKKAGLKNHHILNIIHYSQQTKKSLSLRNMAVVSGTSKPCLFLENYKLLNIKELRVEFKKYPSFSILDKTYP
LALKEIDNPPVLLFYQGNLELLNRHKLAVVGSRKSSAVGNKSVESLIKQLNNQFVIVSGLARGIDTVAHFSSIKQGGETI
AVIGSGLDIYYPKENRRLQEFIAEKHLLLSEYCPKEAPLAHHFPERNRIIAGLSMGVLVAEAKWRSGSLITCRFALDYGR
DIFVVPGAILDKQSQGGNHLIQEGAKLVTKGLDIISEYQFL

Nucleotide

• Length: 846 bp

>NTDB_id=852260 QYR55_RS04720 WP_003099573.1 955126..955971(+) (dprA) [Streptococcus iniae strain Si 1-19]
ATGAATAACTTTGAACTGTATAAATTAAAGAAAGCTGGCCTAAAAAATCATCATATTCTAAATATCATTCATTATAGCCA
GCAAACTAAGAAATCTCTATCACTTAGAAATATGGCTGTTGTTTCAGGAACAAGTAAACCATGTCTGTTTTTAGAAAATT
ACAAGCTGTTAAATATAAAAGAGTTACGAGTAGAATTTAAGAAGTATCCCAGCTTTTCAATTTTAGACAAGACCTATCCC
CTTGCTTTAAAAGAAATTGATAATCCGCCAGTATTATTATTTTATCAAGGAAATTTAGAGCTTTTAAATCGGCATAAATT
AGCAGTGGTAGGGTCAAGGAAATCCTCAGCAGTTGGAAACAAATCTGTTGAATCTCTCATCAAGCAACTTAATAATCAGT
TTGTTATTGTTAGTGGGTTGGCTAGAGGAATTGATACTGTAGCTCATTTTTCGAGCATCAAACAAGGTGGAGAGACTATT
GCTGTTATTGGATCAGGGTTAGACATTTATTATCCTAAGGAAAATAGAAGATTACAGGAGTTTATTGCTGAAAAGCATTT
ATTATTAAGTGAATATTGCCCTAAGGAAGCACCTTTAGCACATCATTTTCCAGAACGAAATCGCATAATTGCAGGCTTAT
CTATGGGAGTTTTAGTGGCAGAAGCCAAATGGCGTTCTGGTAGTCTAATCACTTGTCGCTTTGCACTTGATTACGGTAGG
GATATTTTTGTTGTTCCAGGCGCCATCCTTGACAAACAGTCGCAGGGAGGGAATCACCTCATTCAAGAGGGAGCGAAGCT
TGTTACAAAAGGACTTGACATCATTTCTGAATACCAATTTTTATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

3D structure

• AlphaFold DB: A0A1J0MYY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.786	99.644	0.665
dprA/cilB/dalA	Streptococcus mitis SK321	57.5	99.644	0.573
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.786	99.644	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	99.644	0.544