Detailed information NTG0851297

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLNCDO702_RS09035
• Genome accession: NZ_CP129159
• Coordinates: 1840564..1841553 (-)
• Length: 329 a.a.
• NCBI ID: WP_014570680.1
• Uniprot ID: A0A2X0PLY6
• Organism: Lactococcus lactis subsp. lactis strain NCDO702
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1835564..1846553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLNCDO702_RS09020 (LLNCDO702_09005)	-	1836930..1837856 (-)	927	WP_010906107.1	peptidyl-prolyl cis-trans isomerase	-
LLNCDO702_RS09025 (LLNCDO702_09010)	-	1838010..1838693 (-)	684	WP_010906108.1	O-methyltransferase	-
LLNCDO702_RS09030 (LLNCDO702_09015)	pepF	1838696..1840501 (-)	1806	WP_032398794.1	oligoendopeptidase F	Regulator
LLNCDO702_RS09035 (LLNCDO702_09020)	coiA	1840564..1841553 (-)	990	WP_014570680.1	competence protein CoiA	Machinery gene
LLNCDO702_RS09040 (LLNCDO702_09025)	-	1841628..1842713 (-)	1086	WP_003130405.1	YdcF family protein	-
LLNCDO702_RS09045 (LLNCDO702_09030)	-	1842875..1843723 (-)	849	WP_003130404.1	alpha/beta hydrolase	-
LLNCDO702_RS09050 (LLNCDO702_09035)	-	1843915..1845336 (-)	1422	WP_003130403.1	NCS2 family permease	-
LLNCDO702_RS09055 (LLNCDO702_09040)	-	1845643..1846479 (+)	837	WP_003130402.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 39454.98 Da
• Isoelectric Point: 8.2932

>NTDB_id=851297 LLNCDO702_RS09035 WP_014570680.1 1840564..1841553(-) (coiA) [Lactococcus lactis subsp. lactis strain NCDO702]
MLTAIDENGQVVNLLEIEVKELTGKYFCPSCKSELFIKNGEIKMPHFAHKSLKACDLWLENESEQHLGLKKALYQWFKKT
DKVEIEAYIPEFKQRPDLLVNDTIAIEIQCSHLSMKRLKERTENYQVHGFTVLWLMGQDLWLKDQITELQKNLVYFSENR
GFYYWELDFKAQKMRLKSLIHEDLRGKIIYLQEEIPFGEGRLIEQLRLPFLSQKLLTIPLIVDLKLAEFIRRQLYYCSPK
WLKIQEKYYQRGENLLNLTFERSFIAPLGLNLLEVFDDKIPLHKFTQIKHNINLYYENFLINFQQNSFKEVYSPRFYAIM
KKQKKDMNE

Nucleotide

• Length: 990 bp

>NTDB_id=851297 LLNCDO702_RS09035 WP_014570680.1 1840564..1841553(-) (coiA) [Lactococcus lactis subsp. lactis strain NCDO702]
ATGTTGACAGCAATTGATGAAAATGGACAAGTAGTAAACTTATTAGAAATAGAAGTAAAAGAACTGACAGGAAAATATTT
TTGTCCTTCTTGTAAATCAGAGTTATTTATAAAAAATGGTGAAATAAAGATGCCTCACTTTGCTCATAAATCTCTCAAAG
CTTGCGACTTATGGCTTGAAAACGAATCTGAACAACATTTAGGATTAAAAAAAGCACTCTATCAATGGTTTAAAAAAACT
GATAAGGTGGAAATTGAAGCTTATATTCCTGAATTTAAGCAGAGGCCAGATTTATTGGTAAATGATACAATAGCTATTGA
AATTCAATGTTCTCATCTTTCTATGAAACGTTTAAAAGAAAGGACAGAGAATTATCAAGTCCACGGTTTTACGGTACTTT
GGCTTATGGGGCAAGATTTATGGTTAAAAGACCAAATAACAGAACTTCAAAAAAATCTAGTCTATTTTTCAGAAAATAGA
GGTTTCTATTATTGGGAGTTAGATTTCAAAGCTCAGAAGATGAGATTAAAATCCCTGATTCATGAAGATTTGCGTGGAAA
AATTATTTATTTACAAGAAGAAATTCCTTTTGGGGAAGGACGACTTATTGAGCAATTACGACTGCCTTTTTTATCACAAA
AGTTACTGACAATACCACTTATTGTTGATCTTAAACTAGCAGAATTTATTCGTCGGCAACTTTATTATTGTTCACCAAAA
TGGTTGAAAATTCAGGAAAAATATTACCAAAGAGGTGAAAATTTGTTGAATTTGACTTTTGAACGTTCATTTATTGCTCC
TTTGGGATTGAACTTACTTGAAGTTTTTGATGATAAAATTCCTTTACATAAATTTACTCAAATTAAGCATAATATTAATC
TCTATTATGAAAACTTTTTAATAAATTTTCAGCAAAATAGCTTTAAGGAAGTCTATTCTCCCCGTTTCTATGCTATAATG
AAAAAGCAGAAGAAGGATATGAATGAATGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-265)

3D structure

• AlphaFold DB: A0A2X0PLY6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	74.54	99.088	0.739
coiA	Streptococcus pneumoniae TIGR4	42.857	97.872	0.419
coiA	Streptococcus pneumoniae Rx1	42.857	97.872	0.419
coiA	Streptococcus pneumoniae D39	42.857	97.872	0.419
coiA	Streptococcus pneumoniae R6	42.857	97.872	0.419
coiA	Streptococcus mitis NCTC 12261	42.633	96.96	0.413