Detailed information NTG0851163

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: QWG60_RS16110
• Genome accession: NZ_CP129121
• Coordinates: 3416083..3417588 (-)
• Length: 501 a.a.
• NCBI ID: WP_146909403.1
• Uniprot ID: -
• Organism: Halomonas halophila strain CCM 3662
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3411083..3422588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWG60_RS16085 (QWG60_16085)	-	3411239..3411631 (+)	393	WP_146909397.1	DUF423 domain-containing protein	-
QWG60_RS16090 (QWG60_16090)	-	3411607..3412020 (-)	414	WP_035595012.1	PaaI family thioesterase	-
QWG60_RS16095 (QWG60_16095)	-	3412179..3414353 (-)	2175	WP_146909399.1	malate synthase G	-
QWG60_RS16100 (QWG60_16100)	-	3414583..3415566 (+)	984	WP_035595179.1	alpha/beta hydrolase	-
QWG60_RS16105 (QWG60_16105)	-	3415563..3416063 (+)	501	WP_146909401.1	hypothetical protein	-
QWG60_RS16110 (QWG60_16110)	comM	3416083..3417588 (-)	1506	WP_146909403.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
QWG60_RS16115 (QWG60_16115)	-	3417674..3418033 (-)	360	WP_046078812.1	accessory factor UbiK family protein	-
QWG60_RS16120 (QWG60_16120)	-	3418350..3418688 (+)	339	WP_016855902.1	P-II family nitrogen regulator	-
QWG60_RS16125 (QWG60_16125)	-	3418728..3420050 (+)	1323	WP_107182182.1	ammonium transporter	-
QWG60_RS16130 (QWG60_16130)	glnK	3420197..3420535 (+)	339	WP_035594994.1	P-II family nitrogen regulator	-
QWG60_RS16135 (QWG60_16135)	-	3420807..3421583 (-)	777	WP_016855905.1	ferredoxin--NADP reductase	-

Sequence

Protein

• Length: 501 a.a.
• Molecular weight: 53579.60 Da
• Isoelectric Point: 7.3500

>NTDB_id=851163 QWG60_RS16110 WP_146909403.1 3416083..3417588(-) (comM) [Halomonas halophila strain CCM 3662]
MTLSIVRTRAGLGLEAPEVLVEVHLANGLPGITLVGLPETAVRESRERVRSALVNAGFDFPMRRITLNLAPADLPKEGGR
FDLPIALGLLVASGQIAAEALAEIECAGELALDGALRPVPGMLPLALATRGAGRRLIVPRANADEAALAGDLEVLPADHL
LEVVAHLLGQTPIEPHRASRPAEALTTGADLAEVRGQHQARRALEVAASGGHNLLLAGPPGTGKTMLASRLPGILPPLTE
NEALEVAAVRSVCGLPLDEDWGRRPFRSPHHTASAVALVGGGSRPRPGEISLAHRGVLFLDELPEFPRQVLEVMREPMES
GRIHIARASHERRYPASFQLVAAMNPCPCGHLGDPRRACHCTAAQIQRYQARLSGPLLDRIDLQVEVPALAPEQLTARES
GEPSAAVRERVQAARERQWARGALNARLGSRELEAACALSGADRAWLAGVLERLNLSARAYHRVLRVALTLADLAGEPHP
GREQLVEAIGYRQLDRLLQGR

Nucleotide

• Length: 1506 bp

>NTDB_id=851163 QWG60_RS16110 WP_146909403.1 3416083..3417588(-) (comM) [Halomonas halophila strain CCM 3662]
ATGACCCTGTCGATCGTTCGCACCCGGGCCGGCCTCGGCCTCGAGGCTCCCGAGGTGCTGGTGGAAGTGCATCTGGCCAA
CGGCCTGCCCGGCATCACCCTGGTCGGGCTGCCGGAGACCGCCGTTCGGGAGAGCCGCGAGCGGGTCCGCAGCGCCCTGG
TCAACGCCGGCTTCGACTTCCCGATGCGTCGCATCACCCTCAACCTGGCGCCCGCCGACCTGCCCAAGGAAGGCGGGCGC
TTCGATCTGCCCATCGCCCTGGGGTTGCTGGTGGCCTCGGGCCAGATCGCCGCCGAGGCGCTGGCCGAGATCGAATGCGC
GGGCGAGCTCGCCCTGGACGGCGCGCTGCGTCCGGTGCCCGGGATGCTGCCGCTGGCGCTGGCCACCCGCGGGGCCGGGC
GGCGTCTGATCGTGCCCCGGGCCAACGCCGACGAGGCGGCGCTCGCGGGCGATCTCGAGGTGCTGCCCGCCGATCACCTG
CTCGAGGTGGTCGCACACCTGCTGGGCCAGACGCCGATCGAGCCCCATCGGGCGTCGCGCCCCGCCGAGGCGCTGACGAC
GGGTGCCGATCTCGCCGAGGTACGTGGCCAGCACCAGGCGCGGCGCGCCCTGGAGGTCGCCGCCAGCGGTGGCCACAATC
TCCTGCTGGCCGGTCCTCCAGGCACCGGCAAGACCATGCTGGCCAGCCGCCTGCCCGGGATCCTGCCGCCGCTGACCGAG
AACGAGGCCCTGGAGGTGGCGGCGGTGCGTTCGGTGTGTGGCCTGCCGCTCGACGAGGACTGGGGGCGGCGCCCCTTCCG
CTCGCCCCACCACACCGCCAGCGCGGTGGCGCTGGTCGGCGGTGGCTCGCGGCCCAGGCCCGGCGAGATCTCGCTGGCCC
ATCGGGGCGTGCTGTTCCTCGACGAGTTGCCCGAGTTTCCCCGCCAGGTGCTCGAGGTGATGCGCGAGCCCATGGAATCC
GGGCGCATCCACATCGCCCGCGCCAGCCACGAGCGGCGCTATCCGGCGAGCTTCCAGCTGGTGGCGGCGATGAATCCCTG
CCCCTGCGGCCATCTCGGTGACCCTCGCCGGGCCTGCCACTGCACCGCCGCCCAGATCCAGCGCTATCAGGCGCGGCTTT
CCGGACCGCTGCTCGACCGTATCGACCTGCAGGTGGAGGTGCCGGCGCTGGCGCCGGAGCAGCTGACCGCCCGGGAGAGC
GGAGAGCCCTCGGCGGCGGTACGCGAGCGGGTACAGGCGGCCCGGGAGCGGCAGTGGGCGCGCGGGGCGCTCAATGCCCG
GCTGGGCAGTCGCGAGCTGGAGGCCGCCTGCGCACTGAGCGGGGCGGATCGGGCCTGGCTGGCCGGGGTGCTGGAGCGGC
TCAATCTCTCGGCGCGGGCCTATCATCGGGTGCTGCGGGTGGCGCTGACCCTGGCCGACCTGGCCGGCGAGCCGCACCCC
GGGCGCGAGCAACTGGTCGAGGCGATCGGCTATCGTCAGCTCGATCGGCTGCTGCAGGGGCGTTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-394)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	55.666	100	0.559
comM	Vibrio cholerae strain A1552	55.07	100	0.553
comM	Glaesserella parasuis strain SC1401	53.74	100	0.545
comM	Haemophilus influenzae Rd KW20	53.254	100	0.539
comM	Legionella pneumophila str. Paris	50.402	99.401	0.501
comM	Legionella pneumophila strain ERS1305867	50.402	99.401	0.501
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	48.491	99.202	0.481