Detailed information NTG0848651

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LU678_RS01045
• Genome accession: NZ_CP128544
• Coordinates: 224539..226026 (-)
• Length: 495 a.a.
• NCBI ID: WP_028688629.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain NMI4849_14
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 219539..231026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU678_RS01020 (LU678_001020)	-	219639..219923 (-)	285	WP_028688634.1	DUF3077 domain-containing protein	-
LU678_RS01025 (LU678_001025)	-	220620..220898 (+)	279	WP_088852700.1	HigA family addiction module antitoxin	-
LU678_RS01030 (LU678_001030)	-	220902..222689 (-)	1788	WP_186594484.1	monovalent cation:proton antiporter-2 (CPA2) family protein	-
LU678_RS01035 (LU678_001035)	-	222915..223931 (-)	1017	WP_088851426.1	alpha/beta hydrolase	-
LU678_RS01040 (LU678_001040)	-	223963..224214 (-)	252	WP_028688630.1	DUF2790 domain-containing protein	-
LU678_RS01045 (LU678_001045)	comM	224539..226026 (-)	1488	WP_028688629.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LU678_RS01050 (LU678_001050)	-	226184..228697 (-)	2514	WP_036985631.1	TonB-dependent receptor	-
LU678_RS01055 (LU678_001055)	-	228779..229720 (-)	942	WP_028688627.1	FecR family protein	-
LU678_RS01060 (LU678_001060)	-	229717..230199 (-)	483	WP_028688626.1	sigma-70 family RNA polymerase sigma factor	-
LU678_RS01065 (LU678_001065)	-	230461..230820 (-)	360	WP_028688625.1	DUF2493 domain-containing protein	-

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 52883.63 Da
• Isoelectric Point: 8.1417

>NTDB_id=848651 LU678_RS01045 WP_028688629.1 224539..226026(-) (comM) [Pseudomonas mosselii strain NMI4849_14]
MSLALVHSRAQVGVQAPAVSVETHLANGLPTLTLVGLPETTVKESKDRVRSAIVNSGLDYPARRITQSLAPADLPKDGGR
YDLAIALGILAANGQVPVATLDDIECLGELALSGALRPVQGVLPAALAARDAGRALVVPRENAEEASLASGLVVYAMGHL
RELVAHLNGQPALSPYAANGLLLEQRPYPDLSEVQGQIAAKRALLVAAAGAHNLLFTGPPGTGKTLLASRLPGLLPPLDE
REALEVAAIRSVSGHAPLDSWPQRPFRHPHHSASGPALVGGGSRPQPGEITLAHHGVLFLDELPEFERRVLEVLREPLES
GEIVVARAKDRVRFPARFQLVAAMNPCPCGYLGDPTGRCRCSSEQVQRYRNKLSGPLLDRIDLHLTVARESTVLTHQPSG
ETSASVGQRVAEARALQQRRQGCANAFLDLKGLRRHCPLEPVDQAWLEQACERLTLSLRAAHRLLKVARTLADLEGAQSI
ARAHLAEALQYRPGT

Nucleotide

• Length: 1488 bp

>NTDB_id=848651 LU678_RS01045 WP_028688629.1 224539..226026(-) (comM) [Pseudomonas mosselii strain NMI4849_14]
ATGTCCCTCGCCCTCGTCCACAGCCGCGCCCAGGTGGGTGTGCAGGCCCCCGCCGTCAGCGTCGAAACCCACCTGGCCAA
CGGCCTGCCCACGCTTACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAGAGCAAGGACCGGGTACGCAGCGCCATCG
TCAACTCCGGCCTGGACTACCCGGCCCGGCGCATCACCCAGAGCCTCGCCCCCGCCGACCTGCCCAAGGACGGTGGCCGC
TACGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCAATGGCCAGGTGCCGGTGGCCACCCTCGACGATATCGAATGCCT
GGGTGAGCTGGCCCTGTCGGGCGCCTTGCGCCCGGTACAGGGCGTGCTGCCTGCGGCATTGGCGGCCCGGGATGCGGGTC
GGGCGCTGGTGGTGCCACGGGAGAATGCCGAGGAGGCCAGCCTGGCCAGCGGCCTGGTGGTGTATGCGATGGGGCACCTG
CGCGAGCTGGTGGCCCACCTGAACGGCCAGCCCGCGCTGTCTCCCTACGCGGCCAATGGCCTGCTGCTGGAGCAACGCCC
CTATCCGGACCTCAGCGAAGTCCAGGGCCAGATCGCGGCCAAGCGCGCCCTGCTGGTAGCCGCGGCCGGTGCGCACAACC
TGTTGTTCACAGGTCCCCCGGGCACTGGCAAGACCTTGCTTGCCAGTCGTCTGCCCGGGCTGCTGCCGCCGCTGGACGAG
CGCGAGGCACTGGAGGTGGCGGCGATCCGCTCGGTCAGCGGCCACGCCCCGCTCGATAGCTGGCCACAGCGGCCGTTCCG
CCATCCGCACCATTCGGCCTCAGGTCCGGCGCTGGTCGGCGGGGGCAGCCGGCCGCAACCCGGCGAGATCACCCTGGCGC
ACCATGGCGTGCTGTTTCTCGACGAACTGCCCGAGTTCGAACGGCGAGTGCTGGAGGTGCTGCGCGAACCGCTGGAGTCC
GGCGAGATCGTGGTGGCCCGGGCCAAGGACCGGGTGCGCTTCCCGGCGCGCTTCCAGCTGGTGGCGGCCATGAACCCCTG
CCCCTGTGGCTACCTGGGCGACCCCACCGGCCGCTGCCGGTGCAGCAGCGAGCAGGTCCAGCGCTACCGCAACAAGCTGT
CCGGCCCGCTGCTCGACCGTATCGACCTGCACCTGACGGTAGCCCGGGAAAGTACCGTGCTGACCCACCAGCCCAGTGGC
GAGACCAGCGCGAGCGTTGGCCAGAGAGTGGCCGAGGCACGGGCGCTGCAGCAGCGCCGGCAGGGCTGCGCCAACGCCTT
CCTCGACCTCAAGGGGCTGCGTCGGCATTGCCCGCTGGAGCCGGTTGACCAGGCCTGGCTGGAGCAGGCCTGCGAACGGC
TGACACTGTCGTTGCGGGCGGCGCACCGGCTGCTGAAGGTCGCCCGCACGCTGGCGGACCTGGAGGGCGCGCAATCCATC
GCCAGGGCGCACCTGGCGGAAGCATTGCAGTACCGACCCGGCACTTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	54.89	100	0.556
comM	Glaesserella parasuis strain SC1401	54.491	100	0.552
comM	Vibrio campbellii strain DS40M4	54.949	100	0.549
comM	Vibrio cholerae strain A1552	54.545	100	0.545
comM	Legionella pneumophila str. Paris	48.387	100	0.485
comM	Legionella pneumophila strain ERS1305867	48.387	100	0.485
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	47.211	100	0.479