Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   QSV41_RS13045 Genome accession   NZ_CP128464
Coordinates   2556735..2558033 (+) Length   432 a.a.
NCBI ID   WP_010709051.1    Uniprot ID   -
Organism   Enterococcus faecalis strain RE25     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2551735..2563033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSV41_RS13030 (QSV41_13035) - 2554205..2555164 (+) 960 WP_000221326.1 IS30-like element IS6770 family transposase -
  QSV41_RS13035 - 2555156..2555284 (-) 129 WP_289690732.1 hypothetical protein -
  QSV41_RS13040 (QSV41_13040) rlmH 2555855..2556334 (-) 480 WP_002355021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QSV41_RS13045 (QSV41_13045) htrA 2556735..2558033 (+) 1299 WP_010709051.1 trypsin-like peptidase domain-containing protein Regulator
  QSV41_RS13050 (QSV41_13050) ytpR 2558080..2558700 (-) 621 WP_002361057.1 YtpR family tRNA-binding protein -
  QSV41_RS13055 (QSV41_13055) - 2558911..2559366 (-) 456 WP_002385249.1 universal stress protein -
  QSV41_RS13060 (QSV41_13060) - 2559514..2559828 (-) 315 WP_002355015.1 thioredoxin family protein -
  QSV41_RS13065 (QSV41_13065) pepA 2559840..2560916 (-) 1077 WP_002389404.1 glutamyl aminopeptidase -
  QSV41_RS13070 (QSV41_13070) - 2561223..2561564 (+) 342 WP_002355012.1 PepSY domain-containing protein -

Sequence

Protein


Download         Length: 432 a.a.        Molecular weight: 44830.97 Da        Isoelectric Point: 5.1142

>NTDB_id=847527 QSV41_RS13045 WP_010709051.1 2556735..2558033(+) (htrA) [Enterococcus faecalis strain RE25]
MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNAATTTSTNHGDTKVSNVSYNVSSDVTKAVK
KVQNSVVSVINMQSASNNSSADDPFGGLFGGNEGTQDSSGNNGNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLE
VVLSDGTKVKGELVGTDAYTDLAVIKISSDKVDQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK
NESGETININAIQTDAAINPGNSGGPLINIQGQVIGINSVKIVQSTSQVSVEGMGFAIPSNDVVNIINQLEKDGKVTRPA
LGITMSDLTGISSQQQEQILKIPASVKTGVVVRGVEAATPAEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKME
VTYYRGSKEMKATIDLTIDKSALTQQNNRSNQ

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=847527 QSV41_RS13045 WP_010709051.1 2556735..2558033(+) (htrA) [Enterococcus faecalis strain RE25]
ATGCAACGAAAAGATGTTACACCTAATTCAGATAAAAAAAGTTTATTGCAAAAATTTGGGATTGGTTTAGCTGGCGGCTT
ACTTGGTGGCGCCCTTATTCTAGGAGGCGCTTATTCTGGGATTATTCCCACACCCAACGGCGGAAATAATGCGGCGACGA
CGACATCCACTAATCACGGCGACACAAAAGTCAGCAATGTAAGTTACAATGTGTCTAGCGATGTCACAAAAGCCGTGAAA
AAAGTTCAAAATTCTGTGGTTTCTGTCATTAATATGCAAAGTGCTAGCAACAATTCTTCGGCAGATGATCCTTTTGGGGG
ATTGTTCGGTGGGAATGAAGGTACTCAAGACTCTTCCGGCAACAATGGTAACGATTTAGAAGCAGCCAGTGAAGGTAGTG
GGGTTATTTATAAGAAAGATGGTAAAACGGCTTATGTCGTGACAAATAACCACGTCGTAGATAAAGCGCAAGGATTGGAA
GTTGTTTTATCTGATGGTACCAAAGTGAAAGGCGAATTAGTCGGAACCGATGCTTACACGGATTTAGCCGTGATTAAAAT
TTCTTCCGACAAAGTTGATCAAGTCGCTGAGTTTGGAAATTCTAGTAAAATCACAGTCGGTGAGCCTGCTATTGCAATTG
GTTCCCCTCTAGGCTCTGATTATGCTAACTCTGTCACACAAGGAATCATCTCTTCTGTGAATAGAAATATTACCAATAAA
AACGAGTCTGGTGAAACCATCAATATTAATGCCATTCAAACCGATGCTGCCATCAATCCAGGAAACTCTGGTGGTCCACT
AATCAATATTCAAGGACAAGTCATTGGAATTAACTCAGTAAAAATTGTGCAATCAACTAGTCAAGTGAGCGTTGAAGGGA
TGGGCTTTGCCATTCCAAGTAATGACGTAGTCAACATTATCAACCAATTAGAAAAAGATGGTAAAGTGACGCGGCCAGCT
CTCGGGATTACGATGTCTGATTTAACAGGTATCTCTTCACAACAACAAGAACAAATTTTAAAAATTCCAGCTTCTGTAAA
AACTGGCGTAGTGGTTCGTGGTGTTGAAGCAGCGACCCCTGCTGAAAAGGCTGGATTGGAAAAATACGATGTTATCACGA
AAGTTGACGGCCAAGACGTAAGCTCTACTACAGATTTACAAAGCGCGCTTTACAAGAAAAAAGTTGGCGACAAAATGGAA
GTGACTTATTATCGTGGTTCTAAAGAAATGAAAGCAACTATCGATTTAACCATTGATAAATCAGCTTTAACACAACAAAA
TAATCGCAGCAATCAATAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(9-416)

PDZ domain (PDZ_2)

(319-416)

Trypsin-like peptidase domain (Trypsin_2)

(132-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

53.415

94.907

0.507
  htrA Streptococcus mutans UA159

58.63

84.491

0.495
  htrA Streptococcus mitis NCTC 12261

55.405

85.648

0.475
  htrA Streptococcus pneumoniae TIGR4

56.091

81.713

0.458
  htrA Streptococcus pneumoniae Rx1

56.091

81.713

0.458
  htrA Streptococcus pneumoniae D39

56.091

81.713

0.458
  htrA Streptococcus pneumoniae R6

56.091

81.713

0.458