Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   QN310_RS21360 Genome accession   NZ_CP128411
Coordinates   4423116..4423394 (+) Length   92 a.a.
NCBI ID   WP_289673891.1    Uniprot ID   -
Organism   Brevibacillus brevis strain HNCS-1     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4418116..4428394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN310_RS21335 (QN310_21335) - 4418663..4419196 (-) 534 WP_015892418.1 PadR family transcriptional regulator -
  QN310_RS21340 (QN310_21340) - 4419649..4419900 (+) 252 Protein_4122 trypsin-like peptidase domain-containing protein -
  QN310_RS21345 (QN310_21345) - 4419917..4421011 (-) 1095 WP_289673889.1 YheC/YheD family protein -
  QN310_RS21350 (QN310_21350) - 4421213..4421533 (+) 321 WP_016742092.1 winged helix-turn-helix transcriptional regulator -
  QN310_RS21355 (QN310_21355) - 4421645..4423093 (+) 1449 WP_289673890.1 recombinase family protein -
  QN310_RS21360 (QN310_21360) htrA 4423116..4423394 (+) 279 WP_289673891.1 trypsin-like peptidase domain-containing protein Regulator
  QN310_RS21365 (QN310_21365) - 4423425..4423571 (-) 147 WP_015892424.1 hypothetical protein -
  QN310_RS21370 (QN310_21370) - 4423635..4423916 (-) 282 WP_016742090.1 DUF2325 domain-containing protein -
  QN310_RS21375 (QN310_21375) - 4424247..4424846 (+) 600 WP_289673892.1 IMEF encapsulin system ferritin-like cargo protein -
  QN310_RS21380 (QN310_21380) - 4424884..4425732 (+) 849 WP_007721249.1 family 1 encapsulin nanocompartment shell protein -
  QN310_RS21385 (QN310_21385) - 4425876..4426694 (+) 819 WP_289673893.1 alpha/beta hydrolase -
  QN310_RS21390 (QN310_21390) - 4426749..4427957 (-) 1209 WP_015892428.1 PLP-dependent aminotransferase family protein -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 9799.32 Da        Isoelectric Point: 6.1950

>NTDB_id=847383 QN310_RS21360 WP_289673891.1 4423116..4423394(+) (htrA) [Brevibacillus brevis strain HNCS-1]
MVTGGSPLGLENSVTAGIISAKNRRLQVAKRMYEEIFQTDAAINPGNSGGPLINLNGEVVGLNAFIIQSSQCLGFAIGID
ALKMQLEQYVFK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=847383 QN310_RS21360 WP_289673891.1 4423116..4423394(+) (htrA) [Brevibacillus brevis strain HNCS-1]
ATGGTTACAGGTGGTTCCCCACTTGGTTTGGAAAATTCTGTGACAGCGGGGATCATTAGTGCTAAAAACCGCCGATTACA
GGTTGCGAAGCGAATGTACGAAGAAATTTTTCAGACGGATGCTGCGATTAACCCAGGAAATAGCGGAGGTCCACTCATTA
ATTTGAATGGGGAAGTCGTTGGTCTCAATGCATTCATCATTCAATCCAGCCAATGCTTAGGTTTCGCTATCGGGATTGAC
GCCCTCAAAATGCAACTGGAGCAGTACGTATTCAAGTGA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(5-62)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

46.939

100

0.5
  htrA Streptococcus pneumoniae Rx1

45.918

100

0.489
  htrA Streptococcus pneumoniae D39

45.918

100

0.489
  htrA Streptococcus pneumoniae R6

45.918

100

0.489
  htrA Streptococcus pneumoniae TIGR4

45.918

100

0.489
  htrA Streptococcus mutans UA159

47.727

95.652

0.457
  htrA Streptococcus gordonii str. Challis substr. CH1

44.186

93.478

0.413