Detailed information NTG0846881

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: N7E01_RS16940
• Genome accession: NZ_CP128233
• Coordinates: 3055301..3056800 (+)
• Length: 499 a.a.
• NCBI ID: WP_289173721.1
• Uniprot ID: -
• Organism: Neopusillimonas aromaticivorans strain CC-YST667
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3050301..3061800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7E01_RS16915 (N7E01_16915)	ptsP	3050318..3052007 (+)	1690	Protein_3385	phosphoenolpyruvate--protein phosphotransferase	-
N7E01_RS16920 (N7E01_16920)	amt	3052121..3053345 (-)	1225	Protein_3386	ammonium transporter	-
N7E01_RS16925 (N7E01_16925)	-	3053357..3053693 (-)	337	Protein_3387	P-II family nitrogen regulator	-
N7E01_RS16930 (N7E01_16930)	-	3054229..3054690 (+)	462	WP_289173719.1	hypothetical protein	-
N7E01_RS16935 (N7E01_16935)	-	3054800..3055057 (+)	258	WP_289173720.1	accessory factor UbiK family protein	-
N7E01_RS16940 (N7E01_16940)	comM	3055301..3056800 (+)	1500	WP_289173721.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
N7E01_RS16945 (N7E01_16945)	rpmI	3057131..3057328 (+)	198	WP_119443091.1	50S ribosomal protein L35	-
N7E01_RS16950 (N7E01_16950)	rplT	3057346..3057705 (+)	360	WP_289173722.1	50S ribosomal protein L20	-
N7E01_RS16955 (N7E01_16955)	pheS	3057780..3058802 (+)	1023	WP_289173723.1	phenylalanine--tRNA ligase subunit alpha	-
N7E01_RS16960 (N7E01_16960)	pheT	3058829..3061236 (+)	2408	Protein_3394	phenylalanine--tRNA ligase subunit beta	-
N7E01_RS16965 (N7E01_16965)	-	3061249..3061583 (+)	335	Protein_3395	integration host factor subunit alpha	-

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 52104.19 Da
• Isoelectric Point: 8.2024

>NTDB_id=846881 N7E01_RS16940 WP_289173721.1 3055301..3056800(+) (comM) [Neopusillimonas aromaticivorans strain CC-YST667]
MSLAVVSSRALFGLEAVPVRVEVHVGPGLPAFNLVGLPGAGVRESRDRVRSAILSSGFDFPAGRVTVNLAPADLPKASGR
FDLPIALGILLASGQVACTDDTDMAGLVFAGELSLTGAVVSIDAVLAIALAVARDTPGAILVVPARCADVAASVPGLTVL
AADSLAHVAAHLAGVSGLTVVGYQTLQAADMTGYCLSEVRGQAVARRVLEIAAAGGHSLLMSGPPGTGKSMLANRLPSLL
PPLSHAQALEAMALAGVAGRNQPLDLTPPFRSPHHSCSVAALVGGGVIPRPGEISLAHRGVLFLDELPEFSRQALESLRE
PLETGSVSIARSSRSVVYPARFQLVAAMNPCPCGWLGHGVRACRCTPDRIDHYRSRLSGPLLDRIDLQVVLGAVGRGWSS
LPLGESSAIVRERVTRCRGLQMQRQGCLNADLAGGALERQASLLPEARQALDDIALRHSWSGRVIHRVLRVARTLADLAG
PDVLTRDHVLEAAQYRPAW

Nucleotide

• Length: 1500 bp

>NTDB_id=846881 N7E01_RS16940 WP_289173721.1 3055301..3056800(+) (comM) [Neopusillimonas aromaticivorans strain CC-YST667]
ATGTCGCTTGCAGTGGTGTCCAGCCGTGCCTTGTTCGGGCTTGAGGCCGTGCCGGTGCGTGTCGAAGTGCACGTCGGTCC
GGGGCTTCCGGCCTTCAACCTGGTTGGTCTGCCGGGTGCGGGTGTGCGTGAAAGTCGTGATCGTGTTCGCTCGGCCATTC
TCAGCAGTGGTTTTGATTTTCCGGCAGGCCGGGTAACGGTCAATCTGGCGCCGGCCGACTTGCCCAAGGCCTCGGGGCGG
TTTGATTTGCCTATTGCTCTGGGTATTTTGCTGGCCTCCGGGCAGGTCGCGTGTACCGATGATACCGACATGGCGGGGCT
GGTCTTTGCCGGTGAGCTGTCTCTGACCGGGGCCGTCGTTTCCATCGATGCCGTGCTGGCTATCGCGCTGGCTGTAGCGC
GTGACACACCCGGGGCGATTCTGGTCGTGCCCGCGCGCTGTGCCGATGTGGCGGCCAGTGTTCCCGGGTTAACTGTTCTG
GCAGCCGACAGTCTGGCCCATGTGGCGGCGCACCTTGCCGGGGTGTCCGGTTTGACTGTGGTTGGCTATCAGACGCTACA
GGCAGCCGATATGACAGGGTATTGTTTGTCCGAAGTGCGCGGTCAGGCCGTAGCGCGGCGTGTGCTTGAAATTGCCGCCG
CGGGTGGTCACAGCCTGTTGATGTCAGGCCCGCCGGGTACCGGAAAAAGCATGCTGGCCAATCGATTGCCGTCATTATTG
CCACCGTTGTCGCATGCCCAGGCGCTTGAGGCCATGGCGCTGGCGGGGGTTGCCGGGCGAAACCAGCCCCTGGATTTAAC
GCCACCTTTTCGATCGCCGCACCATTCGTGTTCGGTGGCGGCCCTGGTCGGGGGTGGCGTCATTCCGCGACCGGGCGAAA
TCAGTCTGGCGCATCGAGGCGTGTTGTTTCTTGATGAGTTGCCCGAGTTCAGTCGCCAGGCGCTGGAGTCGCTGCGTGAG
CCGCTGGAAACCGGCTCGGTCAGTATCGCCCGTTCCTCGCGTTCAGTCGTGTATCCTGCCCGATTCCAGCTGGTTGCAGC
CATGAACCCGTGTCCTTGCGGTTGGCTGGGGCATGGCGTTCGTGCGTGTCGGTGCACCCCGGATCGCATCGATCATTATC
GGTCCAGGTTATCGGGGCCGTTGCTTGATCGCATTGATTTACAGGTGGTGCTTGGGGCTGTCGGCCGCGGCTGGTCATCC
TTGCCTTTGGGCGAGTCGTCGGCGATAGTGCGCGAACGAGTCACACGCTGCCGAGGCTTGCAGATGCAGCGTCAGGGGTG
CCTGAATGCCGATCTCGCGGGCGGTGCGCTGGAACGTCAGGCCTCATTGTTGCCCGAGGCGCGTCAGGCGCTTGATGACA
TTGCGCTGCGGCATAGCTGGTCAGGTCGTGTGATTCACCGGGTCTTGCGGGTAGCGCGTACCCTGGCTGATCTGGCCGGG
CCTGATGTTCTGACGCGGGATCACGTTCTCGAGGCTGCACAGTACAGGCCTGCCTGGTAG

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-144)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (196-391)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	48.902	100	0.491
comM	Vibrio campbellii strain DS40M4	48.606	100	0.489
comM	Legionella pneumophila strain ERS1305867	44.622	100	0.449
comM	Legionella pneumophila str. Paris	44.622	100	0.449
comM	Haemophilus influenzae Rd KW20	43.849	100	0.443
comM	Glaesserella parasuis strain SC1401	43.056	100	0.435
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	39.526	100	0.401