Detailed information NTG0845138

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QSG84_RS12055
• Genome accession: NZ_CP127893
• Coordinates: 2586528..2587589 (+)
• Length: 353 a.a.
• NCBI ID: WP_317030616.1
• Uniprot ID: A0AA97F0K3
• Organism: Acinetobacter sp. SAAs470
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2581528..2592589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSG84_RS12040 (QSG84_12035)	-	2581593..2582396 (+)	804	WP_317030613.1	putative RNA methyltransferase	-
QSG84_RS12045 (QSG84_12040)	-	2583278..2583868 (+)	591	WP_317030614.1	hypothetical protein	-
QSG84_RS12050 (QSG84_12045)	ponA	2583848..2586364 (-)	2517	WP_317030615.1	penicillin-binding protein PBP1a	-
QSG84_RS12055 (QSG84_12050)	pilM	2586528..2587589 (+)	1062	WP_317030616.1	pilus assembly protein PilM	Machinery gene
QSG84_RS12060 (QSG84_12055)	comN	2587586..2588230 (+)	645	WP_317030617.1	PilN domain-containing protein	Machinery gene
QSG84_RS12065 (QSG84_12060)	pilO	2588227..2588925 (+)	699	WP_317030618.1	type 4a pilus biogenesis protein PilO	Machinery gene
QSG84_RS12070 (QSG84_12065)	-	2588918..2589442 (+)	525	WP_317030619.1	pilus assembly protein PilP	-
QSG84_RS12075 (QSG84_12070)	pilQ	2589471..2591561 (+)	2091	WP_317030620.1	type IV pilus secretin PilQ	-
QSG84_RS12080 (QSG84_12075)	aroK	2591650..2592147 (+)	498	WP_317032679.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 39264.50 Da
• Isoelectric Point: 4.5886

>NTDB_id=845138 QSG84_RS12055 WP_317030616.1 2586528..2587589(+) (pilM) [Acinetobacter sp. SAAs470]
MFGVLSRPSKGLVGVDISSTSVKLLKLSLKNDGYCLENYAVVPLIEGSIIEKNIINAEAVVDAIKQAMKLIAVSRHDVAF
ALPTSLVVTKTMEMDADVPDDEREVQIRLDAEQYIPFPLDELILDFALVSNAKNLAHRVNILLVATRIENVETRRNVIEL
AGLIPKVADVEMFAIENVLGTFTDLCPVDAGIIVILDIGHTTTTLSVLEQYRTIYNREQVFGGKQLTDAIQQHYHLSFLE
AEYLKKNASLPDDYRDEVLDPFLNLLIQHVQRALQFFFSSSAISDIDYILLTGGCANIMGLTQWLQQELGYPVMMINPFL
NMKLSRKISPQQLANDAPALIVACGLALRSFDQ

Nucleotide

• Length: 1062 bp

>NTDB_id=845138 QSG84_RS12055 WP_317030616.1 2586528..2587589(+) (pilM) [Acinetobacter sp. SAAs470]
GTGTTTGGTGTACTTTCTCGGCCCAGTAAAGGGCTAGTTGGAGTAGATATTAGTTCTACTTCTGTCAAATTATTAAAGCT
TTCTCTTAAAAATGATGGTTATTGCTTAGAAAATTATGCAGTAGTCCCTTTGATTGAAGGCAGTATTATTGAAAAAAATA
TTATCAATGCAGAAGCCGTGGTAGATGCAATCAAACAGGCAATGAAGCTGATTGCTGTGTCTAGACACGATGTAGCGTTT
GCACTTCCAACCTCTCTGGTTGTGACCAAAACTATGGAAATGGATGCAGATGTACCGGACGATGAACGAGAAGTTCAAAT
TCGTCTAGATGCAGAACAGTATATTCCATTTCCTCTCGATGAGTTGATTCTTGACTTTGCGCTTGTGTCGAATGCCAAAA
ACTTAGCGCATCGTGTCAATATTTTGCTGGTTGCAACACGGATAGAAAATGTAGAAACACGTAGAAATGTTATTGAATTA
GCAGGACTTATTCCTAAAGTTGCAGACGTTGAAATGTTTGCAATAGAAAATGTCTTGGGTACTTTTACCGATTTATGTCC
TGTGGATGCTGGGATCATTGTCATTTTGGATATTGGTCATACGACCACAACATTATCCGTCTTAGAGCAATACCGAACGA
TTTATAATCGGGAACAGGTATTTGGTGGAAAACAGTTAACTGATGCAATCCAGCAGCATTATCATTTATCTTTTCTTGAA
GCTGAATATCTTAAAAAAAATGCGTCATTGCCAGATGATTATCGTGATGAAGTTTTAGATCCGTTTCTAAATTTACTCAT
ACAACATGTTCAACGTGCTTTACAGTTCTTTTTTTCCTCCTCTGCGATTAGTGATATTGATTATATTTTATTGACTGGTG
GCTGTGCCAATATCATGGGATTAACCCAATGGTTACAACAAGAGTTAGGTTATCCAGTCATGATGATTAATCCATTCTTA
AACATGAAGCTCAGTCGTAAAATTAGTCCTCAACAATTGGCAAATGATGCGCCAGCGTTGATCGTGGCTTGTGGGCTTGC
GTTAAGGAGTTTTGATCAGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	59.375	99.717	0.592
comM	Acinetobacter nosocomialis M2	59.091	99.717	0.589
comM	Acinetobacter baylyi ADP1	56.091	100	0.561
pilM	Legionella pneumophila strain ERS1305867	37.183	100	0.374