Detailed information NTG0843410

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QRA07_RS10850
• Genome accession: NZ_CP127321
• Coordinates: 2317678..2318493 (-)
• Length: 271 a.a.
• NCBI ID: WP_233732401.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain PC870
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2312678..2323493

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA07_RS10820 (QRA07_10850)	-	2312984..2313424 (-)	441	WP_014206600.1	SRPBCC family protein	-
QRA07_RS10825 (QRA07_10855)	tadA	2313495..2313999 (-)	505	Protein_2102	tRNA adenosine(34) deaminase TadA	-
QRA07_RS10830 (QRA07_10860)	hibch	2314005..2315129 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
QRA07_RS10835 (QRA07_10865)	ung	2315126..2315839 (-)	714	WP_069119298.1	uracil-DNA glycosylase	-
QRA07_RS10840 (QRA07_10870)	-	2315893..2316489 (-)	597	WP_017386831.1	6-carboxytetrahydropterin synthase	-
QRA07_RS10845 (QRA07_10875)	gspK	2316718..2317677 (-)	960	WP_039761082.1	type II secretion system minor pseudopilin GspK	-
QRA07_RS10850 (QRA07_10880)	xcpW	2317678..2318493 (-)	816	WP_233732401.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QRA07_RS10855 (QRA07_10885)	xcpV	2318493..2318873 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
QRA07_RS10860 (QRA07_10890)	-	2318863..2319417 (-)	555	WP_002121405.1	type II secretion system protein	-
QRA07_RS10865 (QRA07_10895)	-	2319424..2320032 (-)	609	WP_233732901.1	TetR/AcrR family transcriptional regulator	-
QRA07_RS10870 (QRA07_10900)	ycfH	2320069..2320842 (-)	774	WP_057085323.1	TatD family hydrolase	-
QRA07_RS10875 (QRA07_10905)	pilZ	2320860..2321201 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
QRA07_RS10880 (QRA07_10910)	holB	2321212..2322192 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
QRA07_RS10885 (QRA07_10915)	kdsB	2322206..2322967 (-)	762	WP_044100054.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30910.40 Da
• Isoelectric Point: 10.1129

>NTDB_id=843410 QRA07_RS10850 WP_233732401.1 2317678..2318493(-) (xcpW) [Acinetobacter pittii strain PC870]
MIKNKCFRYPSTASRLAARSEQMMRGYSEQSSSSCAQTKLRFKGSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNVDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=843410 QRA07_RS10850 WP_233732401.1 2317678..2318493(-) (xcpW) [Acinetobacter pittii strain PC870]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTAAAGGCTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCCCAAGAAGTAACAAAGTGGCCTGAAGTTAATGTTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	86.147	85.24	0.734