Detailed information NTG0838499

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: QPL78_RS13185
• Genome accession: NZ_CP126530
• Coordinates: 2562375..2562992 (-)
• Length: 205 a.a.
• NCBI ID: WP_284559337.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain Tehuacan_S4
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2557375..2567992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPL78_RS13155 (QPL78_13155)	rpsT	2557678..2557944 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
QPL78_RS13160 (QPL78_13160)	holA	2557959..2559002 (-)	1044	WP_101864552.1	DNA polymerase III subunit delta	-
QPL78_RS13165 (QPL78_13165)	-	2559042..2559191 (-)	150	WP_142367341.1	hypothetical protein	-
QPL78_RS13170 (QPL78_13170)	-	2559232..2559366 (+)	135	WP_010335005.1	YqzM family protein	-
QPL78_RS13175 (QPL78_13175)	comEC	2559405..2561735 (-)	2331	WP_284560780.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QPL78_RS13180 (QPL78_13180)	-	2561739..2562308 (-)	570	WP_010335007.1	ComE operon protein 2	-
QPL78_RS13185 (QPL78_13185)	comEA	2562375..2562992 (-)	618	WP_284559337.1	helix-hairpin-helix domain-containing protein	Machinery gene
QPL78_RS13190 (QPL78_13190)	comER	2563076..2563897 (+)	822	WP_284559338.1	late competence protein ComER	-
QPL78_RS13195 (QPL78_13195)	-	2563962..2564705 (-)	744	WP_284559339.1	class I SAM-dependent methyltransferase	-
QPL78_RS13200 (QPL78_13200)	rsfS	2564702..2565058 (-)	357	WP_024122115.1	ribosome silencing factor	-
QPL78_RS13205 (QPL78_13205)	yqeK	2565076..2565636 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
QPL78_RS13210 (QPL78_13210)	-	2565626..2566195 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
QPL78_RS13215 (QPL78_13215)	yhbY	2566206..2566496 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
QPL78_RS13220 (QPL78_13220)	aroE	2566496..2567332 (-)	837	WP_284559340.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21897.76 Da
• Isoelectric Point: 5.1469

>NTDB_id=838499 QPL78_RS13185 WP_284559337.1 2562375..2562992(-) (comEA) [Bacillus halotolerans strain Tehuacan_S4]
MNWLNQHKTIIISVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKGNAEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=838499 QPL78_RS13185 WP_284559337.1 2562375..2562992(-) (comEA) [Bacillus halotolerans strain Tehuacan_S4]
TTGAATTGGTTGAATCAACATAAAACGATAATCATATCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGGAAATGCGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCTGAAGAAAATATTGTAATTGATATAAAAGGCGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCACAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACACTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus MW2	38.182	100	0.41
comEA	Staphylococcus aureus N315	36.818	100	0.395
comEA	Streptococcus thermophilus LMD-9	37.264	100	0.385
comEA	Latilactobacillus sakei subsp. sakei 23K	35.78	100	0.38