Detailed information NTG0837892

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: QLQ03_RS06025
• Genome accession: NZ_CP126456
• Coordinates: 1122398..1123084 (-)
• Length: 228 a.a.
• NCBI ID: WP_172793290.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain KRS010
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1117398..1128084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLQ03_RS05990	fliW	1117534..1117968 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
QLQ03_RS05995	-	1117997..1118575 (-)	579	WP_024719238.1	DUF6470 family protein	-
QLQ03_RS06000	flgL	1118622..1119533 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
QLQ03_RS06005	flgK	1119542..1121062 (-)	1521	WP_024719239.1	flagellar hook-associated protein FlgK	-
QLQ03_RS06010	-	1121078..1121560 (-)	483	WP_007499977.1	flagellar protein FlgN	-
QLQ03_RS06015	flgM	1121579..1121842 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
QLQ03_RS06020	-	1121922..1122341 (-)	420	WP_025208062.1	TIGR03826 family flagellar region protein	-
QLQ03_RS06025	comFC	1122398..1123084 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
QLQ03_RS06030	-	1123081..1123374 (-)	294	WP_008348267.1	competence protein ComFB	-
QLQ03_RS06035	comFA	1123439..1124566 (-)	1128	WP_242731121.1	DEAD/DEAH box helicase	Machinery gene
QLQ03_RS06040	-	1124938..1125780 (-)	843	WP_024719242.1	DegV family protein	-
QLQ03_RS06045	degU	1125992..1126681 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QLQ03_RS06050	degS	1126746..1127921 (-)	1176	WP_008360205.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26116.62 Da
• Isoelectric Point: 10.1473

>NTDB_id=837892 QLQ03_RS06025 WP_172793290.1 1122398..1123084(-) (comFC) [Bacillus altitudinis strain KRS010]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=837892 QLQ03_RS06025 WP_172793290.1 1122398..1123084(-) (comFC) [Bacillus altitudinis strain KRS010]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGGATAAACGACGAGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCTAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373