Detailed information NTG0836768

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OH686_RS13430
• Genome accession: NZ_CP126126
• Coordinates: 2884514..2886007 (-)
• Length: 497 a.a.
• NCBI ID: WP_289533185.1
• Uniprot ID: -
• Organism: Pseudomonas sp. SO81
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2879514..2891007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH686_RS13415 (OH686_13730)	-	2880839..2882227 (-)	1389	WP_289533180.1	NorM family multidrug efflux MATE transporter	-
OH686_RS13420 (OH686_13735)	-	2882366..2883292 (+)	927	WP_289533182.1	LysR substrate-binding domain-containing protein	-
OH686_RS13425 (OH686_13740)	-	2883664..2884464 (+)	801	WP_289533183.1	type 1 glutamine amidotransferase	-
OH686_RS13430 (OH686_13745)	comM	2884514..2886007 (-)	1494	WP_289533185.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
OH686_RS13435 (OH686_13750)	-	2886042..2886302 (-)	261	WP_289533187.1	accessory factor UbiK family protein	-
OH686_RS13440 (OH686_13755)	glnK	2886715..2887053 (+)	339	WP_021700071.1	P-II family nitrogen regulator	-
OH686_RS13445 (OH686_13760)	-	2887089..2888405 (+)	1317	WP_137974619.1	ammonium transporter	-
OH686_RS13450 (OH686_13765)	-	2888502..2889752 (+)	1251	WP_289533195.1	ammonium transporter	-
OH686_RS13455 (OH686_13770)	-	2889909..2890352 (+)	444	WP_137974621.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
OH686_RS13460 (OH686_13775)	sutA	2890431..2890757 (+)	327	WP_137974622.1	transcriptional regulator SutA	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 52784.75 Da
• Isoelectric Point: 7.8745

>NTDB_id=836768 OH686_RS13430 WP_289533185.1 2884514..2886007(-) (comM) [Pseudomonas sp. SO81]
MSLAIVHSRAQVGVEAPPVTVEAHLANGLPSMALVGLPEAAVKESKDRVRSAIQNSGFEFPARRITLNLAPADLPKDGGR
FDLAIALGVLAASGQVPVDSLAELECLGELALSGALRPVQGVLPAALAARAAGRTLVVPSANAEEACLASGLKVLAVDHL
LQIAAHLNGHTPLAPHQANGLLREVPAYPDLAEVQGQLAAKRALLIAASGGHNLLFSGPPGTGKTLLASRLPGLLPPLSE
EEALEVAAIHSVASLAPLSAWPQRPFRQPHHSASGPALVGGGSRPQPGEITLAHQGVLFLDELPEFDRKVLEVLREPLES
GQIVIARARDKVRFPARFQLVAAMNPCPCGYLGDPCGRCRCSPDQVQRYRAKLSGPLLDRIDLHLTVARESTSLQAPAQP
GEDSASVAGRVAQARQRQLRRQGCANAFLDLPGLRRHCPLAEQDQHWLEQACERLNLSLRAAHRLLKVARTLADLEQVEQ
IARAHLAEALQYRPVQA

Nucleotide

• Length: 1494 bp

>NTDB_id=836768 OH686_RS13430 WP_289533185.1 2884514..2886007(-) (comM) [Pseudomonas sp. SO81]
ATGTCCCTGGCCATCGTCCACAGCCGCGCCCAGGTCGGCGTCGAAGCCCCGCCTGTCACTGTCGAGGCGCACCTGGCCAA
CGGCCTGCCGAGCATGGCCCTGGTCGGCCTGCCGGAAGCCGCGGTCAAGGAAAGCAAGGACCGCGTGCGCAGCGCCATCC
AGAACTCCGGCTTCGAATTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCTGCCGACCTGCCCAAGGATGGTGGCCGC
TTCGACCTGGCCATCGCCCTCGGCGTGCTGGCCGCCAGCGGCCAGGTACCGGTGGACAGCCTGGCCGAGCTGGAATGCCT
CGGCGAACTGGCGCTATCCGGCGCCCTGCGGCCGGTACAGGGCGTGCTGCCGGCGGCCCTGGCTGCCCGCGCCGCCGGAC
GCACCCTGGTGGTGCCCAGCGCCAATGCCGAAGAGGCCTGCCTGGCTTCCGGCCTGAAGGTGCTGGCCGTCGACCATCTG
CTGCAGATCGCCGCCCACCTCAACGGCCATACGCCGCTGGCGCCGCACCAGGCCAACGGCCTGCTGCGCGAGGTGCCGGC
CTATCCGGACCTGGCCGAAGTGCAGGGCCAGTTGGCGGCCAAGCGCGCCCTGCTGATCGCCGCCAGCGGCGGCCACAATC
TGTTGTTCAGCGGGCCGCCCGGCACCGGCAAGACCTTGCTCGCCAGTCGCCTGCCCGGCCTGCTCCCTCCGCTGTCCGAG
GAAGAGGCGCTGGAAGTGGCCGCCATCCACTCGGTGGCCAGCCTGGCGCCGCTGTCGGCCTGGCCGCAGCGTCCGTTCAG
GCAACCGCACCACTCGGCTTCCGGACCGGCGCTGGTGGGGGGTGGCAGTCGCCCGCAACCCGGGGAAATCACCCTGGCCC
ATCAGGGCGTGCTGTTCCTTGATGAATTGCCGGAGTTCGACAGAAAGGTATTGGAAGTTTTGCGCGAGCCGCTGGAGAGC
GGGCAGATCGTTATCGCCCGGGCCCGCGACAAGGTGCGTTTCCCCGCCCGCTTTCAGCTGGTGGCGGCGATGAACCCCTG
CCCCTGCGGTTACCTGGGCGACCCCTGCGGGCGTTGCCGCTGCTCGCCGGACCAGGTGCAGCGCTACCGCGCCAAGCTTT
CCGGGCCGCTGCTTGACCGCATCGACCTGCACCTCACCGTCGCGCGCGAGAGCACCAGCCTGCAGGCGCCGGCGCAACCG
GGCGAAGACAGCGCCAGCGTCGCCGGCCGGGTCGCCCAGGCACGGCAACGGCAGCTCAGGCGTCAGGGCTGCGCCAACGC
CTTTCTCGACCTGCCCGGCCTGCGCCGGCATTGCCCGCTGGCCGAGCAGGATCAGCACTGGCTGGAGCAGGCCTGCGAAC
GCCTCAACCTGTCGCTGCGCGCCGCCCACCGCCTGCTCAAGGTGGCGCGTACCCTGGCCGACCTGGAGCAGGTCGAGCAG
ATCGCCCGCGCCCACCTGGCCGAAGCCCTGCAGTACCGGCCGGTCCAGGCCTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	57.258	99.799	0.571
comM	Vibrio cholerae strain A1552	56.566	99.598	0.563
comM	Haemophilus influenzae Rd KW20	54.8	100	0.551
comM	Glaesserella parasuis strain SC1401	54.6	100	0.549
comM	Legionella pneumophila str. Paris	51.004	100	0.511
comM	Legionella pneumophila strain ERS1305867	51.004	100	0.511
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.414	100	0.469