Detailed information NTG0836762

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OH686_RS10730
• Genome accession: NZ_CP126126
• Coordinates: 2260196..2261341 (-)
• Length: 381 a.a.
• NCBI ID: WP_192399133.1
• Uniprot ID: -
• Organism: Pseudomonas sp. SO81
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2255196..2266341

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH686_RS10710 (OH686_10945)	-	2255548..2256819 (+)	1272	WP_289538472.1	dihydroorotase	-
OH686_RS10715 (OH686_10950)	-	2257030..2257428 (-)	399	WP_289538474.1	TM2 domain-containing protein	-
OH686_RS10720 (OH686_10955)	-	2257536..2258747 (+)	1212	WP_289538476.1	putative DNA modification/repair radical SAM protein	-
OH686_RS10725 (OH686_10960)	-	2258747..2260195 (+)	1449	WP_289538478.1	UdgX family uracil-DNA binding protein	-
OH686_RS10730 (OH686_10965)	pilU	2260196..2261341 (-)	1146	WP_192399133.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OH686_RS10735 (OH686_10970)	pilT	2261400..2262434 (-)	1035	WP_289538480.1	type IV pilus twitching motility protein PilT	Machinery gene
OH686_RS10740 (OH686_10975)	-	2262507..2263199 (+)	693	WP_289538482.1	YggS family pyridoxal phosphate-dependent enzyme	-
OH686_RS10745 (OH686_10980)	proC	2263213..2264031 (+)	819	WP_289538484.1	pyrroline-5-carboxylate reductase	-
OH686_RS10750 (OH686_10985)	-	2264041..2264634 (+)	594	WP_289538486.1	YggT family protein	-
OH686_RS10755 (OH686_10990)	-	2264636..2264932 (+)	297	WP_289538488.1	DUF167 family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 42527.72 Da
• Isoelectric Point: 6.6671

>NTDB_id=836762 OH686_RS10730 WP_192399133.1 2260196..2261341(-) (pilU) [Pseudomonas sp. SO81]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVTKNPMSPEQTRETVHSVMNEQQRREFAENHECNFAISARGVGR
FRVSAFYQRNLAGMVLRRIETNIPTIDDLKLPEVLKKLALTKRGLVLFVGATGTGKSTSLAAMIGYRNKNTSGHIISIED
PIEYIHQHQSCIVTQREVGIDTESFEVALKNTLRQAPDVILIGEIRTRETMDYAVAFAETGHLALATLHANNANQALDRI
INFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVHELKGLMKRSTELGMQTFDQA
LYNLYTQGEITYEDALLYADSANDLRLLIKLGSETDGDHLTSMSEGLSLQASEEDPGRRFR

Nucleotide

• Length: 1146 bp

>NTDB_id=836762 OH686_RS10730 WP_192399133.1 2260196..2261341(-) (pilU) [Pseudomonas sp. SO81]
ATGGAATTTGAAAAGCTGTTGCGCTTGATGGTGGAGAAGGGCGGTTCCGACCTGTTCATCACCGCCGGCGTGCCACCGTC
GATGAAGGTCAACGGCAAGATCATGCCGGTGACCAAGAACCCTATGTCGCCGGAGCAGACCCGCGAGACTGTGCACTCGG
TGATGAACGAGCAGCAGCGCCGCGAGTTCGCCGAGAACCACGAGTGCAACTTCGCTATCAGCGCCCGTGGCGTCGGGCGC
TTCCGGGTCAGCGCCTTCTACCAGCGCAACCTGGCCGGCATGGTGCTGCGTCGCATCGAGACCAACATCCCGACCATCGA
CGACCTCAAACTGCCCGAGGTGCTGAAGAAGCTGGCCCTGACCAAGCGCGGTCTGGTGCTGTTCGTCGGCGCTACCGGTA
CCGGTAAATCCACTTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACACCAGCGGCCATATCATCTCCATCGAAGAC
CCGATCGAGTACATCCACCAGCACCAGAGCTGCATCGTCACCCAGCGCGAAGTGGGTATCGATACCGAGTCGTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCCTGATCGGTGAGATCCGTACCCGCGAGACCATGGACTACG
CCGTGGCCTTCGCCGAGACCGGTCACCTGGCCCTGGCCACGCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATCAACTTCTTCCCGCCGGACCGACACAACCAGGTGTGGATGGACCTGTCGCTCAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACTCCTGACGGCAAGGGCCGCCGCGCGGTGATCGAGGTACTGATCAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTCAAGGGCCTGATGAAGCGCTCCACCGAGCTGGGCATGCAGACCTTCGACCAGGCT
CTGTACAACCTCTACACCCAGGGCGAGATCACCTACGAAGACGCCCTGCTCTACGCCGACTCGGCAAACGACCTGCGTCT
GCTGATCAAGCTGGGTTCGGAAACCGATGGCGATCACCTGACCAGCATGAGCGAAGGCCTCAGCCTGCAGGCCAGCGAGG
AAGATCCCGGCCGACGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (110-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	91.601	100	0.916
pilU	Acinetobacter baylyi ADP1	64.13	96.588	0.619
pilU	Vibrio cholerae strain A1552	59.143	91.864	0.543
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.452	88.189	0.383