Detailed information NTG0083388

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: R8568_RS04375
• Genome accession: NZ_AP026931
• Coordinates: 864847..865395 (+)
• Length: 182 a.a.
• NCBI ID: WP_229294014.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701541
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 859847..870395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8568_RS04335 (PC1520_08660)	-	860939..861388 (+)	450	WP_000645889.1	hypothetical protein	-
R8568_RS04340 (PC1520_08670)	-	861381..861761 (+)	381	WP_000566542.1	arsenate reductase family protein	-
R8568_RS04345 (PC1520_08680)	-	861774..862007 (+)	234	WP_000840772.1	hypothetical protein	-
R8568_RS04350 (PC1520_08690)	-	862010..862597 (+)	588	WP_000821293.1	CPBP family intramembrane glutamic endopeptidase	-
R8568_RS04355 (PC1520_08700)	-	862798..862935 (+)	138	WP_000807141.1	hypothetical protein	-
R8568_RS04360 (PC1520_08720)	-	863734..863952 (+)	219	Protein_866	hypothetical protein	-
R8568_RS04365 (PC1520_08730)	-	864251..864538 (-)	288	Protein_867	transposase	-
R8568_RS04370 (PC1520_08740)	-	864537..864800 (+)	264	Protein_868	transposase	-
R8568_RS04375 (PC1520_08750)	comA	864847..865395 (+)	549	WP_229294014.1	ATP-binding cassette domain-containing protein	Regulator
R8568_RS04380 (PC1520_08760)	-	865408..865578 (+)	171	WP_000711943.1	hypothetical protein	-
R8568_RS04385 (PC1520_08770)	-	865846..867192 (+)	1347	WP_001808790.1	IS1380-like element ISSpn5 family transposase	-
R8568_RS04390 (PC1520_08780)	gdhA	867782..869128 (-)	1347	WP_000199551.1	NADP-specific glutamate dehydrogenase	-
R8568_RS04395	-	869470..869694 (+)	225	Protein_873	hypothetical protein	-
R8568_RS04400	-	869797..870241 (+)	445	Protein_874	winged helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 182 a.a.
• Molecular weight: 20317.58 Da
• Isoelectric Point: 7.8649

>NTDB_id=83388 R8568_RS04375 WP_229294014.1 864847..865395(+) (comA) [Streptococcus pneumoniae strain PZ900701541]
MDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMKFNTIISE
MGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIKSQGCTQIIVAHRLSTIKDADIIVVMKGGKIVE
SGNHKYLMDLGGEYYSLYTKRK

Nucleotide

• Length: 549 bp

>NTDB_id=83388 R8568_RS04375 WP_229294014.1 864847..865395(+) (comA) [Streptococcus pneumoniae strain PZ900701541]
ATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTCAAAATTTAGGAGT
AGTTCCACAGGATTCGTTTTTATTGAACAGAAGTATTCTTGATAACATAACTTTAAAGCACGAAGTTACTTCACAAAAGA
TAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATACTATCATCTCAGAG
ATGGGTTCAAATATTTCAGGTGGTCAAAGACAACGGATAGCACTGGCACGTGCATTAATAAATAATCCTAGTATTGTAAT
TTTAGATGAAGCAACTAGTGCTTTAGACACTATTAATGAGGAAAGAATAACAAAGTATATAAAAAGTCAGGGCTGTACTC
AAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTGTTGTAATGAAAGGTGGTAAGATTGTTGAG
TCAGGAAATCATAAGTACTTAATGGATCTTGGTGGAGAGTACTACAGCTTATATACAAAAAGGAAATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (2-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	43.75	96.703	0.423
comA	Streptococcus gordonii str. Challis substr. CH1	43.258	97.802	0.423
comA	Streptococcus mitis SK321	43.182	96.703	0.418
comA/nlmT	Streptococcus mutans UA159	42.222	98.901	0.418
comA	Streptococcus pneumoniae R6	42.614	96.703	0.412
comA	Streptococcus pneumoniae Rx1	42.614	96.703	0.412
comA	Streptococcus pneumoniae D39	42.614	96.703	0.412
comA	Streptococcus pneumoniae TIGR4	41.477	96.703	0.401
rcrQ	Streptococcus mutans UA159	36.216	100	0.368