Detailed information NTG0833820

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: U1R71_RS21265
• Genome accession: NZ_CP140123
• Coordinates: 3979806..3981989 (+)
• Length: 727 a.a.
• NCBI ID: WP_014481436.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SJTU2
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 3974806..3986989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U1R71_RS21230 (U1R71_21230)	-	3974914..3975165 (-)	252	WP_014481429.1	hypothetical protein	-
U1R71_RS21235 (U1R71_21235)	yxbG	3975268..3976090 (+)	823	Protein_4125	SDR family oxidoreductase	-
U1R71_RS21240 (U1R71_21240)	-	3976357..3976557 (+)	201	WP_033881094.1	helix-turn-helix transcriptional regulator	-
U1R71_RS22485	-	3976575..3976976 (+)	402	WP_033881093.1	DUF6773 family protein	-
U1R71_RS21245 (U1R71_21245)	-	3977180..3977398 (-)	219	WP_014481433.1	hypothetical protein	-
U1R71_RS21250 (U1R71_21250)	-	3977443..3977664 (-)	222	WP_014481434.1	Blp family class II bacteriocin	-
U1R71_RS21255 (U1R71_21255)	-	3977986..3979110 (+)	1125	WP_014478926.1	IS4-like element IS4Bsu1 family transposase	-
U1R71_RS21260 (U1R71_21260)	-	3979388..3979642 (+)	255	WP_014481435.1	hypothetical protein	-
U1R71_RS21265 (U1R71_21265)	comA	3979806..3981989 (+)	2184	WP_014481436.1	peptidase domain-containing ABC transporter	Regulator
U1R71_RS21270 (U1R71_21270)	-	3981990..3983459 (+)	1470	WP_014481437.1	HlyD family efflux transporter periplasmic adaptor subunit	-
U1R71_RS21275 (U1R71_21275)	-	3983783..3983899 (-)	117	Protein_4134	TetR/AcrR family transcriptional regulator	-
U1R71_RS21280 (U1R71_21280)	qdoI	3983868..3984902 (-)	1035	WP_014481439.1	quercetin 2,3-dioxygenase	-
U1R71_RS21285 (U1R71_21285)	yxaF	3984996..3985571 (-)	576	WP_014481440.1	transcriptional regulator YxaF	-
U1R71_RS21290 (U1R71_21290)	yxnA	3985702..3986772 (+)	1071	WP_014481441.1	SDR family oxidoreductase	-

Sequence

Protein

• Length: 727 a.a.
• Molecular weight: 82047.88 Da
• Isoelectric Point: 8.0611

>NTDB_id=833820 U1R71_RS21265 WP_014481436.1 3979806..3981989(+) (comA) [Bacillus subtilis strain SJTU2]
MILKKYHCVKQMDDKDCGAACLATILKHYGSKISLAKIRNIAGTDTQGTNVLGVIKAAETLGFSAKGVKADQTAFEQPFP
LPAIAHVVLNGQLLHYMVIHKIKKDKIIIADPGKGIITYRKDEFFKIWTGILIFMVPSDTYQQQTDIRSVKKDILNLILH
QKSLIIHTALASFIITIFGILSTFYFQTIIDQILPNGLKNSLHIISIGLIIMYLFKVLLTAFRQYLMILLGQKLSISIML
GYFKHVLKLPMKFFSTRKDGEILARFNDTNKVIDAIVSASLSAVLDTFMLIMVGIFLYIQNTSLFIVTLALIPFYILTVW
VFMKPYESINDNEMENNAQLTSKIVETLSSIETIKAYNAEYIMSFETEKRFVKYLQSSFKHGVIDNLQSSIKLFLDLISG
ALILWIGAWQVIKGNMTIGQLITYNALLAYFLNPLQNIISLQSKLQSASVASKRLGEILDEEPEIQTSEARVTDPAYIQG
PIEINNVDFRYGTRRLILKDITLHIQKGEKVAFVGESGSGKSTLTKLLMKFYTAESGEILINGYHINDIHTNALRESISY
IPQESHFIQGSILENLLLGNSGSFTFEEIIEVCKQTNVHDFVNDLPMRYDTLVEENGSNLSGGQKQRLAIARALLRKPNI
LIMDESTSNLDTTTEQGISKMIYAQTVDVTTIIIAHRLSTIMNCDKIFVMENGEIIEYGNHNDLLKKKGKYYELWENQMP
SREMVTI

Nucleotide

• Length: 2184 bp

>NTDB_id=833820 U1R71_RS21265 WP_014481436.1 3979806..3981989(+) (comA) [Bacillus subtilis strain SJTU2]
ATGATTTTAAAAAAATATCACTGTGTAAAACAAATGGATGATAAAGATTGCGGTGCTGCGTGTTTAGCAACGATTCTAAA
GCACTATGGATCAAAGATATCACTAGCGAAAATTCGAAATATTGCTGGCACAGATACACAAGGTACTAATGTTCTTGGTG
TAATAAAAGCAGCAGAGACCCTTGGGTTTTCTGCAAAAGGAGTTAAAGCTGATCAAACAGCTTTCGAACAACCGTTCCCT
CTTCCAGCTATTGCACATGTGGTTTTAAATGGTCAATTATTGCATTACATGGTCATACACAAAATTAAAAAAGATAAAAT
TATTATTGCTGATCCAGGAAAAGGTATAATCACCTATAGGAAAGATGAATTTTTTAAGATTTGGACCGGAATTTTAATTT
TTATGGTTCCAAGTGATACTTATCAGCAACAAACAGACATTAGAAGTGTTAAAAAAGACATTTTAAATTTAATACTTCAT
CAAAAATCTTTAATTATACATACAGCATTAGCATCTTTTATTATTACGATCTTCGGTATTCTGAGCACTTTTTATTTTCA
GACAATCATTGATCAAATTTTGCCCAACGGTTTGAAGAACTCTTTACATATTATTTCTATTGGACTTATAATAATGTACC
TATTTAAGGTTCTTTTAACAGCTTTTAGACAATATTTAATGATTCTATTAGGTCAAAAATTAAGTATATCCATTATGCTG
GGTTACTTTAAGCATGTTCTTAAGCTGCCTATGAAATTCTTTAGCACTAGAAAAGATGGTGAAATTTTAGCTAGATTCAA
TGATACAAATAAAGTTATTGATGCTATTGTCAGCGCATCCTTGTCCGCAGTGCTCGATACATTTATGTTAATCATGGTTG
GGATCTTTTTATATATTCAAAATACTTCTTTGTTTATAGTAACATTAGCTTTAATCCCCTTTTATATTCTAACTGTTTGG
GTTTTTATGAAGCCCTATGAGAGTATTAATGACAATGAAATGGAAAATAATGCTCAACTCACTTCAAAAATTGTTGAAAC
ATTAAGTAGTATAGAAACAATAAAAGCTTACAATGCTGAATATATTATGTCATTTGAAACTGAAAAGCGATTTGTGAAAT
ACTTGCAATCTTCTTTTAAACACGGTGTAATTGATAATCTTCAAAGTTCTATTAAGTTGTTTCTAGATTTAATAAGTGGT
GCATTGATACTATGGATCGGCGCTTGGCAAGTCATAAAGGGAAATATGACAATTGGCCAGTTGATTACATATAACGCACT
ATTGGCATATTTTTTGAACCCTTTACAAAATATCATCTCACTTCAATCCAAACTTCAGTCAGCTTCGGTTGCTTCAAAGA
GATTGGGAGAAATTTTAGATGAAGAACCTGAAATACAAACATCTGAAGCAAGGGTTACCGATCCAGCCTATATACAAGGC
CCTATTGAAATAAACAATGTTGATTTTCGATACGGAACTCGAAGGCTCATCTTAAAAGATATTACACTGCATATTCAAAA
AGGAGAGAAAGTTGCCTTTGTTGGAGAAAGCGGTTCAGGAAAATCTACTTTGACTAAGCTTTTAATGAAATTTTATACAG
CTGAATCAGGTGAGATTTTAATCAATGGTTATCATATAAATGATATTCACACCAATGCGTTAAGGGAAAGCATAAGTTAT
ATACCTCAAGAATCTCATTTTATACAAGGATCAATTCTTGAAAACCTTTTGCTTGGGAACTCAGGAAGTTTTACCTTCGA
AGAGATTATAGAAGTTTGCAAACAAACAAATGTACATGATTTTGTCAATGATTTACCAATGAGATACGATACTCTCGTAG
AGGAAAACGGGTCTAATTTATCTGGAGGCCAGAAGCAAAGACTTGCAATTGCCAGGGCATTATTAAGAAAACCTAACATT
CTTATAATGGATGAATCAACAAGCAACCTCGATACGACGACCGAACAGGGAATATCAAAGATGATTTACGCTCAGACTGT
CGATGTAACTACAATTATAATTGCTCATCGTTTAAGTACAATTATGAATTGCGACAAAATATTTGTCATGGAAAATGGAG
AAATCATAGAGTATGGGAACCACAATGATTTATTGAAGAAAAAAGGAAAGTACTATGAGTTGTGGGAGAACCAAATGCCA
TCGAGAGAGATGGTGACAATTTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (169-435)

• Peptidase C39 family (Peptidase_C39) (6-139)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis SK321	41.98	98.624	0.414
comA	Streptococcus mitis NCTC 12261	41.98	98.624	0.414
comA	Streptococcus pneumoniae D39	41.562	98.624	0.41
comA	Streptococcus pneumoniae R6	41.562	98.624	0.41
comA	Streptococcus pneumoniae Rx1	41.562	98.624	0.41
comA	Streptococcus gordonii str. Challis substr. CH1	41.562	98.624	0.41
comA	Streptococcus pneumoniae TIGR4	41.423	98.624	0.409
comA/nlmT	Streptococcus mutans UA159	40.642	98.487	0.4