Detailed information NTG0831564

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: QMK52_RS08085
• Genome accession: NZ_CP125376
• Coordinates: 1855307..1856803 (-)
• Length: 498 a.a.
• NCBI ID: WP_320403996.1
• Uniprot ID: -
• Organism: Pseudomonas sp. P9_2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1850307..1861803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK52_RS08065 (QMK52_08065)	-	1850619..1851539 (+)	921	WP_005792461.1	LysR substrate-binding domain-containing protein	-
QMK52_RS27340	-	1851718..1852791 (+)	1074	Protein_1591	Cache 3/Cache 2 fusion domain-containing protein	-
QMK52_RS27345	-	1852972..1853694 (+)	723	WP_371920243.1	methyl-accepting chemotaxis protein	-
QMK52_RS08075 (QMK52_08075)	-	1853698..1854612 (-)	915	WP_194439574.1	ABC transporter six-transmembrane domain-containing protein	-
QMK52_RS08080 (QMK52_08080)	-	1854725..1855300 (+)	576	WP_005792458.1	TetR/AcrR family transcriptional regulator	-
QMK52_RS08085 (QMK52_08085)	comM	1855307..1856803 (-)	1497	WP_320403996.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
QMK52_RS08090 (QMK52_08090)	-	1857476..1857739 (-)	264	WP_005792456.1	accessory factor UbiK family protein	-
QMK52_RS08095 (QMK52_08095)	glnK	1858162..1858500 (+)	339	WP_005792455.1	P-II family nitrogen regulator	-
QMK52_RS08100 (QMK52_08100)	-	1858535..1859872 (+)	1338	WP_005792454.1	ammonium transporter	-
QMK52_RS08105 (QMK52_08105)	-	1860082..1860507 (+)	426	WP_005792453.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
QMK52_RS08110 (QMK52_08110)	sutA	1860610..1860942 (+)	333	WP_005792452.1	transcriptional regulator SutA	-
QMK52_RS08115 (QMK52_08115)	-	1861070..1861765 (-)	696	WP_005792450.1	HAD family hydrolase	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 53446.60 Da
• Isoelectric Point: 8.1015

>NTDB_id=831564 QMK52_RS08085 WP_320403996.1 1855307..1856803(-) (comM) [Pseudomonas sp. P9_2]
MSLAIVHSRAQVGVEAPAVTVEVHMANGLPSLTLVGLPETAVKESKDRVRSAILNSALQYPARRITLNLAPADLPKDGGR
FDLAIALGILAASVQVPALMLDDVECLGELALSGEVRAVKGVLPAALAARKAGRTVIVPRANAEEACLASGLKVIAVDHL
LQVVAHLNGHVPIEPYRSDGLLYLNKPYPDLSEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLSE
QEALEVAAIQSVVSLTPLSHWPNRPFRQPHHSASGPALVGGGSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVISRARDRVSFPARFQLVAAMNPCPCGYMGEPSGRCRCTPEQIQRYRNKLSGPLLDRIDLHLTVAREVTALSPSQQA
GDTTAQASAQVAQARERQHQRQGCANAFLDLPRLREHCQLTKADESWLESACERLTLSLRAAHRLLKVARTLADLEQVEG
IARHHLAEALQYRPAAHG

Nucleotide

• Length: 1497 bp

>NTDB_id=831564 QMK52_RS08085 WP_320403996.1 1855307..1856803(-) (comM) [Pseudomonas sp. P9_2]
ATGTCCCTCGCTATCGTGCACAGCCGCGCCCAGGTCGGCGTCGAAGCCCCCGCCGTCACCGTTGAAGTGCATATGGCCAA
TGGCTTGCCATCGCTGACGCTGGTGGGCCTGCCGGAAACTGCAGTAAAGGAAAGCAAGGACCGCGTTCGCAGCGCCATTC
TCAACTCGGCGCTGCAATACCCGGCCCGGCGCATCACCCTCAATCTCGCGCCCGCCGACCTACCCAAGGACGGCGGGCGC
TTTGATCTGGCGATTGCCCTGGGGATCCTGGCGGCCAGTGTGCAAGTGCCGGCCTTGATGCTTGATGACGTGGAGTGCCT
TGGTGAGTTGGCGTTATCGGGCGAGGTACGGGCGGTGAAGGGTGTGTTGCCGGCCGCGCTTGCGGCGCGCAAGGCCGGGC
GCACCGTGATAGTGCCCAGGGCCAATGCCGAGGAAGCCTGCCTGGCGTCGGGGCTCAAAGTGATTGCGGTGGACCACCTG
CTGCAAGTGGTGGCGCACCTTAATGGGCATGTGCCGATTGAGCCCTACAGGTCCGACGGCTTGCTGTACTTGAACAAGCC
TTACCCGGACCTGAGTGAAGTGCAGGGCCAACTGGCAGCCAAGCGTGCCTTGCTGATTGCGGCGGCCGGCGCACATAACC
TGCTGTTCAGCGGACCACCCGGTACCGGCAAGACCCTGTTGGCCAGCCGCCTGCCGGGCTTGCTGCCACCGCTGAGCGAG
CAGGAGGCGCTGGAAGTGGCCGCGATCCAATCCGTGGTCAGCCTGACCCCCCTTAGCCATTGGCCTAATCGCCCGTTTCG
CCAGCCGCACCACTCGGCATCCGGCCCGGCGCTGGTGGGTGGCGGCTCGAAGCCGCAGCCGGGGGAAATCACCCTGGCCC
ATCACGGCGTGCTGTTTCTGGATGAGCTGCCGGAATTTGATCGCAAGGTACTGGAGGTGCTGCGCGAGCCATTGGAGTCG
GGGCATATCGTGATCTCCCGAGCCAGGGACCGGGTGAGTTTCCCGGCACGCTTCCAGTTGGTCGCGGCCATGAACCCCTG
CCCGTGCGGCTACATGGGCGAACCCAGCGGGCGTTGTCGGTGCACGCCGGAGCAGATACAGCGCTATCGCAACAAGCTAT
CCGGGCCGCTGCTGGACCGGATTGATTTGCACCTGACAGTCGCCCGGGAGGTCACTGCGCTGAGCCCCTCCCAACAGGCC
GGTGACACCACCGCGCAAGCGTCCGCCCAGGTGGCGCAAGCCCGTGAACGCCAGCACCAGCGCCAGGGTTGTGCCAATGC
ATTCCTCGATCTGCCACGGCTACGCGAACACTGCCAGTTGACCAAAGCCGATGAAAGCTGGCTGGAAAGCGCGTGCGAAC
GACTGACATTATCGCTGCGTGCAGCCCATCGGTTGCTCAAGGTGGCTCGCACCCTGGCGGACCTTGAGCAAGTGGAAGGC
ATCGCCCGCCATCATTTGGCGGAGGCGCTGCAGTACCGACCAGCCGCTCATGGCTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-389)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	56.768	99.398	0.564
comM	Glaesserella parasuis strain SC1401	55.689	100	0.56
comM	Vibrio cholerae strain A1552	56.364	99.398	0.56
comM	Haemophilus influenzae Rd KW20	55	100	0.552
comM	Legionella pneumophila str. Paris	50.4	100	0.506
comM	Legionella pneumophila strain ERS1305867	50.4	100	0.506
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.23	100	0.468