Detailed information NTG0830852

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: QL280_RS09410
• Genome accession: NZ_CP125291
• Coordinates: 1830685..1831146 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250534.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 105_Kz
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1825685..1836146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QL280_RS09375 (QL280_09375)	-	1825989..1826813 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
QL280_RS09380 (QL280_09380)	rnpA	1826788..1827159 (-)	372	WP_000739246.1	ribonuclease P protein component	-
QL280_RS09385 (QL280_09385)	-	1827176..1827307 (-)	132	WP_000768904.1	hypothetical protein	-
QL280_RS09390 (QL280_09390)	-	1827308..1828498 (-)	1191	WP_000167766.1	acetate kinase	-
QL280_RS09395 (QL280_09395)	comYH	1828549..1829502 (-)	954	WP_000345101.1	class I SAM-dependent methyltransferase	Machinery gene
QL280_RS09400 (QL280_09400)	-	1829563..1830157 (-)	595	Protein_1830	methyltransferase domain-containing protein	-
QL280_RS09405 (QL280_09405)	comGG/cglG	1830294..1830707 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
QL280_RS09410 (QL280_09410)	comGF/cglF	1830685..1831146 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
QL280_RS09415 (QL280_09415)	comGE/cglE	1831109..1831411 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
QL280_RS09420 (QL280_09420)	comGD/cglD	1831374..1831778 (-)	405	WP_000588028.1	competence type IV pilus minor pilin ComGD	Machinery gene
QL280_RS09425 (QL280_09425)	comGC/cglC	1831771..1832097 (-)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
QL280_RS09430 (QL280_09430)	comGB/cglB	1832099..1833115 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
QL280_RS09435 (QL280_09435)	comGA/cglA/cilD	1833063..1834004 (-)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
QL280_RS09440 (QL280_09440)	-	1834080..1834445 (-)	366	WP_000286415.1	DUF1033 family protein	-
QL280_RS09445 (QL280_09445)	-	1834596..1835654 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17972.67 Da
• Isoelectric Point: 9.6092

>NTDB_id=830852 QL280_RS09410 WP_000250534.1 1830685..1831146(-) (comGF/cglF) [Streptococcus pneumoniae strain 105_Kz]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSVRITEDNQLVRFHFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=830852 QL280_RS09410 WP_000250534.1 1830685..1831146(-) (comGF/cglF) [Streptococcus pneumoniae strain 105_Kz]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGATGATTTCCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGACTCAAATCTGTACGGATTACAGAGGACAATCAACTGGTTCGCTTTCATT
TCCAGTTCCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	100	100	1
comGF/cglF	Streptococcus pneumoniae D39	100	100	1
comGF/cglF	Streptococcus pneumoniae R6	100	100	1
comGF/cglF	Streptococcus pneumoniae TIGR4	100	100	1
comGF/cglF	Streptococcus mitis SK321	90.85	100	0.909
comGF/cglF	Streptococcus mitis NCTC 12261	89.542	100	0.895