Detailed information NTG0083055

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: R8623_RS06045
• Genome accession: NZ_AP026928
• Coordinates: 1197396..1198037 (-)
• Length: 213 a.a.
• NCBI ID: WP_000151486.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700406
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1192396..1203037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8623_RS06015 (PC0401_11780)	-	1192529..1192771 (+)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
R8623_RS06020 (PC0401_11790)	-	1192828..1193406 (-)	579	WP_000252103.1	hypothetical protein	-
R8623_RS06025 (PC0401_11800)	-	1193381..1194394 (-)	1014	Protein_1192	Dyp-type peroxidase	-
R8623_RS06030	-	1194364..1195030 (-)	667	Protein_1193	winged helix-turn-helix domain-containing protein	-
R8623_RS06035 (PC0401_11820)	gdhA	1195371..1196717 (+)	1347	WP_000199566.1	NADP-specific glutamate dehydrogenase	-
R8623_RS06040 (PC0401_11830)	-	1197213..1197383 (-)	171	WP_000711943.1	hypothetical protein	-
R8623_RS06045 (PC0401_11840)	comA	1197396..1198037 (-)	642	WP_000151486.1	ATP-binding cassette domain-containing protein	Regulator
R8623_RS06050	-	1198162..1198349 (-)	188	Protein_1197	hypothetical protein	-
R8623_RS06055 (PC0401_11850)	-	1198310..1198906 (+)	597	WP_078136022.1	transposase	-
R8623_RS06060 (PC0401_11860)	-	1199056..1199250 (-)	195	Protein_1199	ROK family protein	-
R8623_RS06065 (PC0401_11870)	-	1199277..1200194 (-)	918	WP_016569715.1	dihydrodipicolinate synthase family protein	-
R8623_RS06070 (PC0401_11880)	-	1200226..1200633 (-)	408	WP_000216067.1	cytidine deaminase	-
R8623_RS06075 (PC0401_11890)	-	1200921..1201409 (-)	489	WP_000872894.1	phosphatidylglycerophosphatase A	-
R8623_RS06080 (PC0401_11900)	-	1201414..1202823 (-)	1410	WP_050074378.1	hypothetical protein	-

Sequence

Protein

• Length: 213 a.a.
• Molecular weight: 23575.41 Da
• Isoelectric Point: 9.6786

>NTDB_id=83055 R8623_RS06045 WP_000151486.1 1197396..1198037(-) (comA) [Streptococcus pneumoniae strain PZ900700406]
MTIESGQRIALVGQPGSGKSTLSKIPSRLYKIDTGKVLFDGININQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEGRITKYIQS
QGCTQIIIAHRLSTIKDADIIFVMKGGKIVESGNHKYLMTLGGEYYSLYTKRK

Nucleotide

• Length: 642 bp

>NTDB_id=83055 R8623_RS06045 WP_000151486.1 1197396..1198037(-) (comA) [Streptococcus pneumoniae strain PZ900700406]
TTGACTATTGAGTCAGGACAGAGAATTGCACTAGTCGGTCAACCGGGGTCAGGAAAAAGTACATTATCAAAAATACCATC
AAGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTATAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGCACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGGAAGAATAACAAAGTATATACAAAGT
CAGGGTTGTACTCAAATAATTATAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTTTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGACTCTTGGTGGAGAGTACTACAGCTTATATACAAAAAGGAAAT
GA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	42.857	98.592	0.423
comA	Streptococcus mitis SK321	42.381	98.592	0.418
comA/nlmT	Streptococcus mutans UA159	41.981	99.531	0.418
comA	Streptococcus pneumoniae R6	41.429	98.592	0.408
comA	Streptococcus pneumoniae Rx1	41.429	98.592	0.408
comA	Streptococcus pneumoniae D39	41.429	98.592	0.408
comA	Streptococcus gordonii str. Challis substr. CH1	41.038	99.531	0.408
comA	Streptococcus pneumoniae TIGR4	40.476	98.592	0.399
rcrQ	Streptococcus mutans UA159	36.62	100	0.366