Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   OH685_RS03645 Genome accession   NZ_CP125227
Coordinates   745022..746155 (-) Length   377 a.a.
NCBI ID   WP_282463806.1    Uniprot ID   -
Organism   Acinetobacter pittii strain SO1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 740022..751155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS03620 (OH685_03645) - 740190..740954 (-) 765 WP_282463803.1 helix-turn-helix transcriptional regulator -
  OH685_RS03625 (OH685_03650) nepI 740976..742190 (-) 1215 WP_046813020.1 MFS transporter -
  OH685_RS03630 (OH685_03655) - 742326..742979 (+) 654 WP_282463804.1 TetR/AcrR family transcriptional regulator -
  OH685_RS03635 (OH685_03660) - 743083..744003 (+) 921 WP_282463805.1 DMT family transporter -
  OH685_RS03640 (OH685_03665) yrdC 744401..744970 (-) 570 WP_005072030.1 Sua5/YciO/YrdC/YwlC family protein -
  OH685_RS03645 (OH685_03670) dprA 745022..746155 (-) 1134 WP_282463806.1 DNA-processing protein DprA Machinery gene
  OH685_RS03650 (OH685_03675) tsaP 746176..747330 (-) 1155 WP_005804748.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OH685_RS03655 (OH685_03685) def 747453..747983 (+) 531 WP_002114101.1 peptide deformylase -
  OH685_RS03660 (OH685_03690) - 748027..748452 (+) 426 WP_005804747.1 DUF2946 family protein -
  OH685_RS03665 (OH685_03695) oprC 748525..750639 (+) 2115 WP_017482415.1 TonB-dependent copper receptor -
  OH685_RS03670 (OH685_03700) - 750693..750899 (+) 207 WP_005804745.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41834.34 Da        Isoelectric Point: 6.5419

>NTDB_id=830434 OH685_RS03645 WP_282463806.1 745022..746155(-) (dprA) [Acinetobacter pittii strain SO1]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAVQPAGLSQWRNLGLHANHLKRVDEFQTAQGQAQFEKLTEQI
QQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAEITSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=830434 OH685_RS03645 WP_282463806.1 745022..746155(-) (dprA) [Acinetobacter pittii strain SO1]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGGTCCAACCTGCTGGATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTGAAAAACTAACTGAGCAGATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGTTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGCCAGGCTCAAGCTTTGTTGCAACCTCAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTACTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGC
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAATGGCGCGATTATTACTGAATTTTTGCCTGGAACAC
CCCCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACA
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCTGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCTACTCAATGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACCCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCTGAAATCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.981

100

0.91

  dprA Acinetobacter baumannii strain A118

90.451

100

0.905

  dprA Acinetobacter baylyi ADP1

70.866

100

0.716

  dprA Vibrio cholerae strain A1552

44.144

88.329

0.39