Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   OH685_RS03650 Genome accession   NZ_CP125227
Coordinates   746176..747330 (-) Length   384 a.a.
NCBI ID   WP_005804748.1    Uniprot ID   A0A009MGU9
Organism   Acinetobacter pittii strain SO1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 741176..752330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS03630 (OH685_03655) - 742326..742979 (+) 654 WP_282463804.1 TetR/AcrR family transcriptional regulator -
  OH685_RS03635 (OH685_03660) - 743083..744003 (+) 921 WP_282463805.1 DMT family transporter -
  OH685_RS03640 (OH685_03665) yrdC 744401..744970 (-) 570 WP_005072030.1 Sua5/YciO/YrdC/YwlC family protein -
  OH685_RS03645 (OH685_03670) dprA 745022..746155 (-) 1134 WP_282463806.1 DNA-processing protein DprA Machinery gene
  OH685_RS03650 (OH685_03675) tsaP 746176..747330 (-) 1155 WP_005804748.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OH685_RS03655 (OH685_03685) def 747453..747983 (+) 531 WP_002114101.1 peptide deformylase -
  OH685_RS03660 (OH685_03690) - 748027..748452 (+) 426 WP_005804747.1 DUF2946 family protein -
  OH685_RS03665 (OH685_03695) oprC 748525..750639 (+) 2115 WP_017482415.1 TonB-dependent copper receptor -
  OH685_RS03670 (OH685_03700) - 750693..750899 (+) 207 WP_005804745.1 hypothetical protein -
  OH685_RS03675 (OH685_03705) - 750967..752181 (-) 1215 WP_282463807.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42641.54 Da        Isoelectric Point: 7.2977

>NTDB_id=830435 OH685_RS03650 WP_005804748.1 746176..747330(-) (tsaP) [Acinetobacter pittii strain SO1]
MKKVFDGMVQFHALGIKKHLLALALFTGVAFSTVAETYAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFLSKPWRWP
EIWANNQHVKNPHWIYPGDRLLLCSLDGRPLIGKDEGDGCVGIIRRYTGQMTNLQPQVRVESLNNNVPVIPLEHIKQWLE
HSTILPIDAIQHTPYVVGTADQRVLAAKGQTIYARGQGLIDGQRYAVYREGEPYYFTDNKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVMPEEEATLPTLFYPVDATQVTDGGKIIRVMGSIGTAAKNSVVTLDRGTAQGIQVGQ
VFDITQQGETIRDPKTKEPIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPVKVGSSIQPPRFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=830435 OH685_RS03650 WP_005804748.1 746176..747330(-) (tsaP) [Acinetobacter pittii strain SO1]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTGGCACTTTTTAC
AGGGGTTGCATTCAGTACGGTAGCAGAGACTTATGCTGCTAGTCCGAACCATAATCCACCCTCTCTTAAAAGTAATGCAC
CACATGTCTACGTTGTAAAACGAGGAGATACGCTATGGGATATTTCCGGTCATTTTCTGAGTAAACCTTGGCGCTGGCCT
GAAATTTGGGCAAACAATCAGCATGTCAAAAATCCACACTGGATTTATCCTGGTGATCGATTACTGCTGTGTAGTTTAGA
TGGCCGCCCATTGATCGGTAAAGATGAGGGAGATGGCTGTGTCGGCATTATTCGCCGTTACACAGGCCAAATGACAAATT
TACAACCTCAAGTTCGTGTGGAGTCACTTAACAATAACGTACCTGTTATTCCCCTTGAACATATCAAACAATGGTTAGAA
CACAGCACTATTCTACCTATCGATGCAATTCAACACACTCCTTATGTAGTCGGTACTGCCGATCAACGTGTACTTGCAGC
AAAAGGTCAAACTATTTATGCGCGCGGACAAGGTTTAATTGATGGTCAACGTTACGCAGTTTATCGTGAAGGTGAACCTT
ATTATTTCACCGATAATAAAGGCAAAAAGCACAGTCTAGGTATTGAGCTACAACAAGTTGCCTCAGGGATTGCGATCTCT
TCTGAAAAAGACATTACCACGCTTGAGTTAACTGATAGCTACAATTCTGAAGTACGTCGTGGTGATCGGGTAATGCCAGA
AGAAGAAGCAACATTGCCTACTTTGTTTTATCCGGTAGATGCCACTCAGGTGACGGACGGCGGCAAAATTATTCGTGTAA
TGGGCTCAATTGGTACTGCTGCCAAAAATAGTGTGGTCACTTTAGATCGCGGTACGGCACAAGGTATTCAAGTAGGACAA
GTTTTTGATATTACGCAACAAGGTGAAACCATTCGAGATCCTAAAACCAAAGAACCAATACAGTTACCAGGACAACAAAT
TGGTAGTCTGATGGTCTTTAGAACTTTTGATCAGTTGAGTTATGCCTACGTATTAGAAAGCGATTTACCAGTTAAAGTTG
GTTCAAGCATCCAGCCACCCCGCTTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009MGU9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

90.104

100

0.901