Detailed information    

insolico Bioinformatically predicted

Overview


Name   uvrA   Type   Machinery gene
Locus tag   SLQ83_RS00920 Genome accession   NZ_CP139208
Coordinates   206113..208947 (-) Length   944 a.a.
NCBI ID   WP_000083355.1    Uniprot ID   A0A0D8FGA4
Organism   Acinetobacter baumannii strain HNNY86G     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 201113..213947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SLQ83_RS00910 (SLQ83_00910) omp33-36 202483..203382 (-) 900 WP_000733005.1 porin Omp33-36 -
  SLQ83_RS00915 (SLQ83_00915) - 204373..206079 (+) 1707 WP_000016109.1 GGDEF domain-containing protein -
  SLQ83_RS00920 (SLQ83_00920) uvrA 206113..208947 (-) 2835 WP_000083355.1 excinuclease ABC subunit UvrA Machinery gene
  SLQ83_RS00925 (SLQ83_00925) - 209244..209846 (+) 603 WP_000826320.1 TetR/AcrR family transcriptional regulator -
  SLQ83_RS00930 (SLQ83_00930) - 209850..210827 (+) 978 WP_001256570.1 zinc-binding dehydrogenase -
  SLQ83_RS00935 (SLQ83_00935) - 210893..211246 (+) 354 WP_000580166.1 DUF1304 domain-containing protein -
  SLQ83_RS00940 (SLQ83_00940) - 211299..211640 (+) 342 WP_000263327.1 GlpM family protein -
  SLQ83_RS00945 (SLQ83_00945) tenA 211691..212365 (-) 675 WP_000899418.1 thiaminase II -
  SLQ83_RS00950 (SLQ83_00950) - 212628..213710 (+) 1083 WP_000680211.1 DUF475 domain-containing protein -

Sequence


Protein


Download         Length: 944 a.a.        Molecular weight: 104386.69 Da        Isoelectric Point: 6.5117

>NTDB_id=829975 SLQ83_RS00920 WP_000083355.1 206113..208947(-) (uvrA) [Acinetobacter baumannii strain HNNY86G]
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSQMEKPEVDSIEG
LSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPYCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRER
KGEYSNLFEQLQGQGFVRARVDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPELAISEGAIRGWDRQRPYYYS
MLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLSYIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQ
YLSNAACDACGGSRLNEISRHVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGNTVLVVEHDEDAIRAADHIID
IGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIEVPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCV
TGVSGSGKSTLINRTLLPLAATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEVGYKGKNISDVLEMTVEDAAE
FFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRVKLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHEL
RNKGNTIVVIEHNLDVIKTADWVVDLGPEGGSGGGMIIAEGTPEQVAEVEISHTGRFLKPMLKQ

Nucleotide


Download         Length: 2835 bp        

>NTDB_id=829975 SLQ83_RS00920 WP_000083355.1 206113..208947(-) (uvrA) [Acinetobacter baumannii strain HNNY86G]
ATGAGCCAAAGTCATATCCGTATTCGAGGCGCACGTACCCATAACTTAAAAAATGTGTCACTCGATATTCCACGCGACAA
ATTTGTGGTAATTACGGGGCTATCAGGTTCAGGAAAATCTTCTCTTGCCTTTGATACCTTGTATGCCGAAGGACAGCGCC
GTTATGTCGAATCACTTTCGGCATATGCCCGTCAGTTTTTATCGCAAATGGAAAAACCTGAAGTTGACTCGATTGAAGGT
TTATCACCAGCCATTGCCATTGAGCAAAAGTCTACCAGTCATAACCCACGTTCAACCGTTGGTACGATTACCGAAATTTA
TGACTATTTACGTCTGCTTTATGCACGTGTCGGTACGCCTTATTGCCCTGAACACGACTTACCTATGGTTGCGCAAACTG
TTTCTGAAATGGTCGATGCGGTAAAGAACCTTGAGGAAGGTACAGCACTTATGTTGCTTGCCCCTGTTGTTCGTGAGCGT
AAAGGTGAATACAGCAACTTGTTCGAACAACTACAAGGTCAAGGTTTTGTTCGTGCGCGTGTTGATGGTGAAATCATTGA
TATTGATACACCACCAGAACTCGACAAAAAGAAAAAACATACCATTGAAGTCGTTGTTGACCGCTTTAAAGTACGTGATG
ACTTAGGCAACCGTATTGCTGAATCATTTGAAACTGCACTGCGTTTAGGTGGCGATATTGCCGTTTTATCGTGGATGAAT
GGCGAACACCCAGATCGCGTTTTTTCTGCAAAACACTCATGCCCTGAATGTGATCGCGCAGTCGCAGAGCTTGAGCCACG
TTTATTTTCATTTAATAACCCGTTCGGTGCGTGCCCTGTCTGTGATGGCTTAGGTACACGTAGCCATTTTAGCCCTGAAA
AACTCATTCCTAACCCTGAGCTTGCAATTAGTGAAGGTGCTATTCGTGGTTGGGATCGTCAACGTCCTTATTACTATTCA
ATGCTGCAAAAAGTTGCCGACCATTTCGGTTTTCAACTTGATACACCTTGGAATCAGTTAGATAAAGACACGCAAAAGAA
ATTCTTACAAGGTACTGGCAAAGAAAAAATCGATTTAAGTTATATCGATGAACGCGGCCGTAAACATACTCGCGTACAAC
CGTTTGAGGGAATCTTGCCCCACCTTGAGCGCCGCTACCGTGAAACTGAAAGTAACTATGTACGAGACGATTTAGCTCAA
TATCTCTCTAATGCAGCGTGTGATGCATGTGGCGGTTCACGTCTCAATGAAATTTCACGTCATGTTCGTGTAAAAGATAA
AACCATTGCCGACATTACCCGCATGTCGATTGGAGATGCCGAAAGTTACTATCAAGGTATAAACCTTGAAGGTGCCAAAG
GTGAAATTGCAGATAAAATCTTTAAAGAGATTCGTGAGCGCTTACACTTCTTGGTGAGTGTTGGCCTGAACTATTTAAGT
CTGGCTCGTTCTGCCGAAACACTATCGGGTGGTGAAGCCCAGCGTATCCGTCTAGCTTCGCAAATTGGTGCAGGTTTGAT
GGGTGTCATGTACGTCCTTGATGAACCATCAATTGGTCTCCATCAACGTGATAATGACCGTTTATTACAAACGCTAATTC
GCTTACGTGACTTAGGTAATACGGTATTAGTTGTTGAACATGATGAAGATGCAATCCGTGCAGCTGACCATATTATTGAT
ATCGGCCCTGGTGCTGGTGTGCATGGTGGCGTTGTCATTGCTGAAGGTACGTATGATGAGCTGGCTAAACATGCCGACTC
ACTCACAGGCCAATATCTTTCAGGCAAACTCAAAATTGAAGTGCCAAAACAGCGAACTCAACCACCTAAACCTGAAGAAA
AAATTAAACTTTCAGGTGCAGCGGGTCATAACTTAAAAAATGTCGATTTAACCATCCCACTTGGCATTATGACCTGTGTC
ACGGGTGTTTCAGGTTCAGGTAAATCAACACTGATTAACCGTACGTTACTCCCACTGGCTGCAACACAGCTCAACGGTGC
AACAACCTTAACCGCTGAAAAATTTGATTCAATTGATGGTCTTCAACATCTGGATAAAGTCGTTGATATTGACCAAAGCC
CAATCGGCCGTACACCGCGCTCTAATCCAGCGACTTATACGGGTCTATTTACGCCAATTCGTGAGTTATTTGCTCAAACA
CCAGAAGCGAAAGCTCGTGGTTATAGTGCGGGTCGCTTCTCGTTTAACGTAAAAGGCGGACGCTGCGAAGCGTGTGAAGG
CGACGGTATGATTAAAGTCGCAATGCACTTCTTACCAGACATGTATGTACCTTGCGATGCTTGTCATGGCAAACGTTATA
ACCGTGAAACACTTGAAGTCGGTTATAAAGGCAAAAACATTTCTGATGTTTTAGAAATGACGGTTGAAGATGCTGCTGAG
TTCTTTAGTGCTATTCCAGTTATTCACCGCCGCTTAGAAACCTTAACTCAGGTTGGCTTAGGCTATATTCGTTTAGGTCA
GGCGGCTACTACTTTATCGGGTGGTGAAGCACAGCGTGTCAAACTGGCTCGTGAGTTAGCGAAACGTGATACGGGTAAAA
CGCTTTATATCTTGGATGAACCAACAACAGGTCTGCATTTCCATGATATTGCCAAGTTACTCGATATTTTGCATGAGCTA
CGCAACAAGGGTAATACCATTGTGGTGATTGAACATAACCTTGATGTCATTAAAACAGCAGACTGGGTGGTCGACTTAGG
TCCAGAAGGTGGTTCGGGCGGTGGTATGATCATTGCCGAAGGTACACCTGAACAAGTAGCCGAGGTTGAAATTTCCCATA
CTGGCCGCTTCTTGAAACCGATGTTGAAACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D8FGA4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

56.25

100

0.563

  uvrA Streptococcus pneumoniae TIGR4

56.25

100

0.563

  uvrA Streptococcus pneumoniae D39

56.25

100

0.563