Detailed information NTG0082978

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: H7678_RS00735
• Genome accession: NZ_AP023393
• Coordinates: 120944..121270 (+)
• Length: 108 a.a.
• NCBI ID: WP_003055259.1
• Uniprot ID: A0A9X8T184
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain 89
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 115944..126270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7678_RS00720 (SDSE89_00950)	-	118588..118953 (+)	366	WP_003055257.1	DUF1033 family protein	-
H7678_RS00725 (SDSE89_00960)	comGA/cglA	119034..119975 (+)	942	WP_003062163.1	competence type IV pilus ATPase ComGA	Machinery gene
H7678_RS00730 (SDSE89_00970)	comYB	119911..120942 (+)	1032	WP_050807598.1	competence type IV pilus assembly protein ComGB	Machinery gene
H7678_RS00735 (SDSE89_00980)	comYC	120944..121270 (+)	327	WP_003055259.1	competence type IV pilus major pilin ComGC	Machinery gene
H7678_RS00740	comGD	121245..121673 (+)	429	WP_037589807.1	competence type IV pilus minor pilin ComGD	-
H7678_RS00745 (SDSE89_00990)	comGE	121681..121926 (+)	246	WP_003049263.1	competence type IV pilus minor pilin ComGE	-
H7678_RS00750 (SDSE89_01000)	comGF	121907..122347 (+)	441	WP_003061780.1	competence type IV pilus minor pilin ComGF	-
H7678_RS00755 (SDSE89_01010)	comGG	122370..122699 (+)	330	WP_003062466.1	competence type IV pilus minor pilin ComGG	-
H7678_RS00760 (SDSE89_01020)	comYH	122762..123715 (+)	954	WP_003060701.1	class I SAM-dependent methyltransferase	Machinery gene
H7678_RS00765 (SDSE89_01030)	-	123774..124970 (+)	1197	WP_003058485.1	acetate kinase	-
H7678_RS00770 (SDSE89_01040)	-	125276..125482 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
H7678_RS00775 (SDSE89_01050)	-	125585..126265 (+)	681	WP_003060329.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12384.38 Da
• Isoelectric Point: 9.6412

>NTDB_id=82978 H7678_RS00735 WP_003055259.1 120944..121270(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSQLKT
DGSITDKQVKAYTDYYGKHRDETQKLQP

Nucleotide

• Length: 327 bp

>NTDB_id=82978 H7678_RS00735 WP_003055259.1 120944..121270(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTAAGTCAATTAAAGACT
GATGGCAGTATTACAGATAAGCAGGTAAAAGCTTACACAGACTATTATGGAAAACACAGAGATGAGACTCAAAAACTGCA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	60.194	95.37	0.574
comGC/cglC	Streptococcus mitis SK321	53.774	98.148	0.528
comGC	Lactococcus lactis subsp. cremoris KW2	54.369	95.37	0.519
comGC/cglC	Streptococcus mitis NCTC 12261	55.556	91.667	0.509
comGC/cglC	Streptococcus pneumoniae Rx1	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae D39	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae R6	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	51.402	99.074	0.509
comYC	Streptococcus mutans UA140	53.465	93.519	0.5
comYC	Streptococcus mutans UA159	53.465	93.519	0.5
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417