Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | H7677_RS00760 | Genome accession | NZ_AP023391 |
| Coordinates | 118427..119380 (+) | Length | 317 a.a. |
| NCBI ID | WP_184493713.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain DAT299 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 113427..124380
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7677_RS00720 (DAT299_01070) | - | 113573..114523 (-) | 951 | WP_184493703.1 | S66 peptidase family protein | - |
| H7677_RS00725 (DAT299_01080) | comYA | 114609..115559 (+) | 951 | WP_184493705.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| H7677_RS00730 (DAT299_01090) | comYB | 115471..116508 (+) | 1038 | WP_269473649.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| H7677_RS00735 (DAT299_01100) | comYC | 116510..116791 (+) | 282 | WP_184493707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| H7677_RS00740 (DAT299_01110) | comGD | 116772..117179 (+) | 408 | WP_184493709.1 | competence type IV pilus minor pilin ComGD | - |
| H7677_RS00745 (DAT299_01120) | comYE | 117151..117444 (+) | 294 | WP_011921722.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| H7677_RS00750 (DAT299_01130) | comGF/cglF | 117431..117865 (+) | 435 | WP_079268055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| H7677_RS00755 (DAT299_01140) | comGG | 117843..118370 (+) | 528 | WP_184493711.1 | competence type IV pilus minor pilin ComGG | - |
| H7677_RS00760 (DAT299_01150) | comYH | 118427..119380 (+) | 954 | WP_184493713.1 | class I SAM-dependent methyltransferase | Machinery gene |
| H7677_RS00765 (DAT299_01160) | - | 119430..120617 (+) | 1188 | WP_184493715.1 | acetate kinase | - |
| H7677_RS00770 (DAT299_01170) | - | 120932..121483 (+) | 552 | WP_184493717.1 | folate family ECF transporter S component | - |
| H7677_RS00775 (DAT299_01180) | - | 121537..122793 (+) | 1257 | WP_184493719.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| H7677_RS00780 (DAT299_01190) | pepA | 122839..123900 (-) | 1062 | WP_184493721.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35801.97 Da Isoelectric Point: 4.4133
>NTDB_id=82880 H7677_RS00760 WP_184493713.1 118427..119380(+) (comYH) [Streptococcus suis strain DAT299]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNKTLKQLDLTKEEWRRTYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARLLTPFVYPLQSLQEPEAIQKFMLNFKIWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNKTLKQLDLTKEEWRRTYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARLLTPFVYPLQSLQEPEAIQKFMLNFKIWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=82880 H7677_RS00760 WP_184493713.1 118427..119380(+) (comYH) [Streptococcus suis strain DAT299]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAGCAACTAGATTTAACCAAGGAAGAATGGCGTCGTACCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACAGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATTGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAATTTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAGCAACTAGATTTAACCAAGGAAGAATGGCGTCGTACCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACAGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATTGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAATTTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |