Detailed information NTG0082423

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: R8625_RS04885
• Genome accession: NZ_AP026923
• Coordinates: 952631..953242 (+)
• Length: 203 a.a.
• NCBI ID: WP_061642211.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700054
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 947631..958242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8625_RS04860 (PC0054_09580)	-	948232..949314 (+)	1083	Protein_959	alpha amylase N-terminal ig-like domain-containing protein	-
R8625_RS04865	-	949308..950212 (+)	905	Protein_960	relaxase	-
R8625_RS11000 (PC0054_09610)	-	950209..950385 (-)	177	Protein_961	helix-turn-helix domain-containing protein	-
R8625_RS04870	-	950465..950527 (+)	63	WP_133457516.1	SHP2/SHP3 family peptide pheromone	-
R8625_RS04875 (PC0054_09620)	-	950608..951156 (+)	549	WP_000059558.1	lanthionine synthetase LanC family protein	-
R8625_RS04880 (PC0054_09630)	-	951146..952462 (+)	1317	WP_130883504.1	cysteine peptidase family C39 domain-containing protein	-
R8625_RS04885 (PC0054_09640)	comA	952631..953242 (+)	612	WP_061642211.1	ATP-binding cassette domain-containing protein	Regulator
R8625_RS04890 (PC0054_09650)	-	953285..953455 (+)	171	WP_000757486.1	hypothetical protein	-
R8625_RS04895 (PC0054_09660)	-	953489..954217 (+)	729	WP_001018881.1	ABC transporter ATP-binding protein	-
R8625_RS04900 (PC0054_09670)	-	954210..954948 (+)	739	Protein_968	ABC transporter permease	-
R8625_RS04905 (PC0054_09680)	-	954961..955671 (+)	711	WP_000771192.1	hypothetical protein	-
R8625_RS04910 (PC0054_09690)	-	956219..956440 (+)	222	WP_000286245.1	helix-turn-helix domain-containing protein	-
R8625_RS04915	-	956888..957202 (+)	315	Protein_971	transposase family protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22222.80 Da
• Isoelectric Point: 7.8446

>NTDB_id=82423 R8625_RS04885 WP_061642211.1 952631..953242(+) (comA) [Streptococcus pneumoniae strain PZ900700054]
MTIEPGQRIALVGQSGSGKSTLSKILSGLYKIDTGKILFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKNEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIQS
QGCTQIIIAHRLSTIKDADIIFVMKGGKIVESGNHKYLMDLGG

Nucleotide

• Length: 612 bp

>NTDB_id=82423 R8625_RS04885 WP_061642211.1 952631..953242(+) (comA) [Streptococcus pneumoniae strain PZ900700054]
TTGACTATTGAGCCAGGACAGAGAATTGCACTAGTCGGTCAATCGGGGTCAGGAAAAAGTACGTTATCAAAAATACTATC
AGGATTATATAAGATTGATACAGGAAAAATTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGAACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGAAAGAATAACAAAGTATATACAAAGT
CAGGGTTGTACTCAAATAATTATAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTTTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	44.39	100	0.448
comA	Streptococcus mitis SK321	43.902	100	0.443
comA	Streptococcus gordonii str. Challis substr. CH1	42.995	100	0.438
comA	Streptococcus pneumoniae R6	42.927	100	0.433
comA	Streptococcus pneumoniae Rx1	42.927	100	0.433
comA	Streptococcus pneumoniae D39	42.927	100	0.433
comA	Streptococcus pneumoniae TIGR4	41.951	100	0.424
comA/nlmT	Streptococcus mutans UA159	42.079	99.507	0.419
rcrQ	Streptococcus mutans UA159	37.438	100	0.374