Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QGO80_RS00995 Genome accession   NZ_CP123969
Coordinates   160617..161372 (+) Length   251 a.a.
NCBI ID   WP_000425368.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain CS2108     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 155617..166372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QGO80_RS00980 (QGO80_00980) - 156052..157602 (-) 1551 WP_000722386.1 ABC transporter substrate-binding protein/permease -
  QGO80_RS00985 (QGO80_00985) - 157738..159612 (+) 1875 WP_000710500.1 DUF2207 domain-containing protein -
  QGO80_RS00990 (QGO80_00990) - 159658..160497 (+) 840 WP_000905325.1 undecaprenyl-diphosphate phosphatase -
  QGO80_RS00995 (QGO80_00995) mecA 160617..161372 (+) 756 WP_000425368.1 adaptor protein MecA Regulator
  QGO80_RS01000 (QGO80_01000) - 161374..162534 (+) 1161 WP_000612109.1 MraY family glycosyltransferase -
  QGO80_RS01005 (QGO80_01005) sufC 162699..163469 (+) 771 WP_000114502.1 Fe-S cluster assembly ATPase SufC -
  QGO80_RS01010 (QGO80_01010) sufD 163506..164768 (+) 1263 WP_000031278.1 Fe-S cluster assembly protein SufD -
  QGO80_RS01015 (QGO80_01015) - 164770..166002 (+) 1233 WP_000173347.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29010.84 Da        Isoelectric Point: 4.2155

>NTDB_id=823360 QGO80_RS00995 WP_000425368.1 160617..161372(+) (mecA) [Streptococcus agalactiae strain CS2108]
MEMKQISETTLKITISMEDLEDRGMELKDFLIPQEKTEEFFYSVMDELDLPENFKNSGMLSFRVTPKKDRIDVFVTKSEL
SKDLNLEELADLGDISKMSPEDFFKTLEQSLLEKGDTDAHAKLAEIENMMDKATQEVVEENVSEEQAEKEVETIGYVHYV
FDFDNIEAVVRFSQTIDFPIEASELYKNGKGYHMTILLDLENQPSYFANLMYARMLEHANVGTKTRAYLKEHSIQLIHDD
AISKLQMIEMG

Nucleotide


Download         Length: 756 bp        

>NTDB_id=823360 QGO80_RS00995 WP_000425368.1 160617..161372(+) (mecA) [Streptococcus agalactiae strain CS2108]
ATGGAAATGAAACAAATCAGTGAAACAACACTGAAAATTACAATTAGTATGGAAGATTTAGAAGATCGTGGTATGGAGCT
GAAAGATTTCCTAATCCCTCAGGAGAAGACTGAGGAATTTTTCTATTCTGTCATGGATGAATTAGACTTGCCAGAAAACT
TTAAAAATAGTGGTATGTTAAGTTTTCGAGTAACACCTAAAAAAGATCGCATTGATGTTTTTGTTACAAAGTCTGAATTA
AGTAAAGATTTAAATTTAGAAGAATTAGCAGATTTGGGTGACATTTCAAAAATGTCTCCAGAAGACTTTTTTAAAACATT
GGAACAATCGCTGTTGGAAAAAGGGGATACGGATGCCCATGCCAAATTAGCAGAAATTGAAAATATGATGGATAAAGCAA
CTCAAGAAGTAGTTGAGGAAAATGTTTCTGAAGAACAAGCTGAAAAGGAAGTAGAAACGATTGGATATGTTCACTATGTC
TTTGATTTTGATAATATTGAAGCTGTAGTTCGATTTTCACAAACGATTGATTTTCCAATAGAAGCTTCTGAACTCTATAA
AAATGGTAAAGGCTATCATATGACAATTTTGCTAGACTTGGAAAACCAACCAAGCTACTTTGCTAATTTGATGTATGCTC
GAATGCTTGAACATGCTAATGTGGGCACAAAAACACGAGCTTACTTGAAAGAGCATAGTATTCAATTGATTCATGATGAT
GCTATTTCAAAATTACAAATGATTGAGATGGGATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-245)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

67.742

98.805

0.669
  mecA Streptococcus thermophilus LMD-9

59.438

99.203

0.59
  mecA Streptococcus thermophilus LMG 18311

58.635

99.203

0.582
  mecA Streptococcus pneumoniae Rx1

46.614

100

0.466
  mecA Streptococcus pneumoniae D39

46.614

100

0.466
  mecA Streptococcus pneumoniae R6

46.614

100

0.466
  mecA Streptococcus pneumoniae TIGR4

46.614

100

0.466