Detailed information NTG0082304

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: R8586_RS05180
• Genome accession: NZ_AP026922
• Coordinates: 996606..997217 (+)
• Length: 203 a.a.
• NCBI ID: WP_061631169.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700038
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 991606..1002217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8586_RS05155 (PC0038_10220)	-	992207..993289 (+)	1083	Protein_1020	alpha amylase N-terminal ig-like domain-containing protein	-
R8586_RS05160	-	993283..994187 (+)	905	Protein_1021	relaxase	-
R8586_RS11455 (PC0038_10260)	-	994184..994360 (-)	177	Protein_1022	helix-turn-helix domain-containing protein	-
R8586_RS05165	-	994440..994502 (+)	63	WP_133457516.1	SHP2/SHP3 family peptide pheromone	-
R8586_RS05170 (PC0038_10270)	-	994778..995131 (+)	354	WP_231633727.1	lanthionine synthetase LanC family protein	-
R8586_RS05175 (PC0038_10280)	-	995124..996437 (+)	1314	WP_000197307.1	cysteine peptidase family C39 domain-containing protein	-
R8586_RS05180 (PC0038_10290)	comA	996606..997217 (+)	612	WP_061631169.1	ATP-binding cassette domain-containing protein	Regulator
R8586_RS05185 (PC0038_10300)	-	997260..997430 (+)	171	WP_000757486.1	hypothetical protein	-
R8586_RS05190 (PC0038_10310)	-	997464..998192 (+)	729	WP_001018881.1	ABC transporter ATP-binding protein	-
R8586_RS05195 (PC0038_10320)	-	998185..998922 (+)	738	WP_000593057.1	ABC transporter permease	-
R8586_RS05200 (PC0038_10330)	-	998935..999660 (+)	726	WP_000771191.1	hypothetical protein	-
R8586_RS05205 (PC0038_10340)	-	1000163..1001116 (-)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-
R8586_RS05210 (PC0038_10350)	-	1001448..1001669 (+)	222	WP_000286251.1	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22280.84 Da
• Isoelectric Point: 7.1356

>NTDB_id=82304 R8586_RS05180 WP_061631169.1 996606..997217(+) (comA) [Streptococcus pneumoniae strain PZ900700038]
MTIEPGQRIALVGQSGSGKSTLSKILSGLYKIDTGKILFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKNEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIQS
QDCTQIIIAHRLSTIKDADIIFVMKGGKIVESGNHKYLMDLGG

Nucleotide

• Length: 612 bp

>NTDB_id=82304 R8586_RS05180 WP_061631169.1 996606..997217(+) (comA) [Streptococcus pneumoniae strain PZ900700038]
TTGACTATTGAGCCAGGACAGAGAATTGCACTAGTCGGTCAATCGGGGTCAGGAAAAAGTACGTTATCAAAAATACTATC
AGGATTATATAAGATTGATACAGGAAAAATTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGAACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGAAAGAATAACAAAGTATATACAAAGT
CAGGATTGTACTCAAATAATTATAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTTTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	44.878	100	0.453
comA	Streptococcus mitis SK321	44.39	100	0.448
comA	Streptococcus gordonii str. Challis substr. CH1	43.478	100	0.443
comA	Streptococcus pneumoniae R6	43.415	100	0.438
comA	Streptococcus pneumoniae Rx1	43.415	100	0.438
comA	Streptococcus pneumoniae D39	43.415	100	0.438
comA	Streptococcus pneumoniae TIGR4	42.439	100	0.429
comA/nlmT	Streptococcus mutans UA159	42.079	99.507	0.419
rcrQ	Streptococcus mutans UA159	36.946	100	0.369