Detailed information NTG0081963

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: R8613_RS06360
• Genome accession: NZ_AP026919
• Coordinates: 1226730..1227371 (-)
• Length: 213 a.a.
• NCBI ID: WP_219565711.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700012
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1221730..1232371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8613_RS06330 (PC0012_12260)	-	1222072..1223007 (+)	936	WP_000401770.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-
R8613_RS06335 (PC0012_12270)	-	1223103..1223345 (+)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
R8613_RS06340 (PC0012_12280)	-	1223402..1223620 (-)	219	WP_000028151.1	hypothetical protein	-
R8613_RS06345	-	1223617..1224368 (-)	752	Protein_1259	transposase	-
R8613_RS06350 (PC0012_12300)	gdhA	1224705..1226051 (+)	1347	WP_000199561.1	NADP-specific glutamate dehydrogenase	-
R8613_RS06355 (PC0012_12310)	-	1226547..1226717 (-)	171	WP_000757485.1	hypothetical protein	-
R8613_RS06360 (PC0012_12320)	comA	1226730..1227371 (-)	642	WP_219565711.1	ATP-binding cassette domain-containing protein	Regulator
R8613_RS06365	-	1227496..1227682 (-)	187	Protein_1263	hypothetical protein	-
R8613_RS06370 (PC0012_12330)	-	1227643..1228167 (+)	525	WP_219565712.1	transposase	-
R8613_RS06375 (PC0012_12340)	-	1228381..1228575 (-)	195	Protein_1265	ROK family protein	-
R8613_RS06380 (PC0012_12350)	-	1228602..1229519 (-)	918	Protein_1266	dihydrodipicolinate synthase family protein	-
R8613_RS06385 (PC0012_12360)	-	1229551..1229958 (-)	408	WP_000216067.1	cytidine deaminase	-
R8613_RS06390 (PC0012_12370)	-	1230246..1230734 (-)	489	WP_000872894.1	phosphatidylglycerophosphatase A	-
R8613_RS06395 (PC0012_12380)	-	1230739..1232148 (-)	1410	WP_000773464.1	hypothetical protein	-
R8613_RS11325	-	1232158..1232355 (-)	198	WP_256864594.1	hypothetical protein	-

Sequence

Protein

• Length: 213 a.a.
• Molecular weight: 23477.25 Da
• Isoelectric Point: 9.2381

>NTDB_id=81963 R8613_RS06360 WP_219565711.1 1226730..1227371(-) (comA) [Streptococcus pneumoniae strain PZ900700012]
MTIEPGQRIALVGQSGSGKSTLSKIPSGLYKIDTGKILFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKNEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIKS
QGCTQIIVAHRLSTIKDADIIVVMKGGKIVESGNHKYLMDLGGEYYSLYTKRK

Nucleotide

• Length: 642 bp

>NTDB_id=81963 R8613_RS06360 WP_219565711.1 1226730..1227371(-) (comA) [Streptococcus pneumoniae strain PZ900700012]
TTGACTATTGAGCCAGGACAGAGAATTGCACTAGTCGGTCAATCGGGGTCAGGAAAAAGTACGTTATCAAAAATACCATC
AGGATTATATAAGATTGATACAGGAAAAATTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGAACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCTTTAGACACTATTAATGAGGAAAGAATAACAAAGTATATAAAAAGT
CAGGGCTGTACTCAAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTGTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGAGAGTACTACAGCTTATATACAAAAAGGAAAT
GA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	44.286	98.592	0.437
comA	Streptococcus mitis SK321	43.81	98.592	0.432
comA	Streptococcus gordonii str. Challis substr. CH1	42.925	99.531	0.427
comA	Streptococcus pneumoniae R6	42.857	98.592	0.423
comA	Streptococcus pneumoniae Rx1	42.857	98.592	0.423
comA	Streptococcus pneumoniae D39	42.857	98.592	0.423
comA/nlmT	Streptococcus mutans UA159	41.981	99.531	0.418
comA	Streptococcus pneumoniae TIGR4	41.905	98.592	0.413
rcrQ	Streptococcus mutans UA159	36.321	99.531	0.362