Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO49_RS08885 | Genome accession | NZ_CP123151 |
| Coordinates | 1729525..1730028 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain GE-MRSA18 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1708288..1734091 | 1729525..1730028 | within | 0 |
Gene organization within MGE regions
Location: 1708288..1734091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO49_RS08715 (QAO49_08710) | - | 1708288..1708539 (-) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| QAO49_RS08720 (QAO49_08715) | - | 1708839..1709102 (+) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAO49_RS08725 (QAO49_08720) | - | 1709240..1709812 (-) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| QAO49_RS08730 (QAO49_08725) | - | 1709993..1710361 (-) | 369 | WP_000849177.1 | YxeA family protein | - |
| QAO49_RS08735 (QAO49_08730) | selX | 1710730..1711341 (-) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| QAO49_RS08740 (QAO49_08735) | - | 1711547..1712248 (+) | 702 | Protein_1681 | tyrosine-type recombinase/integrase | - |
| QAO49_RS08745 (QAO49_08740) | - | 1712287..1713225 (+) | 939 | WP_001822249.1 | Abi family protein | - |
| QAO49_RS08750 (QAO49_08745) | - | 1714010..1714195 (-) | 186 | WP_001286805.1 | hypothetical protein | - |
| QAO49_RS08755 (QAO49_08750) | - | 1714197..1714307 (-) | 111 | WP_000139423.1 | hypothetical protein | - |
| QAO49_RS08760 (QAO49_08755) | - | 1714378..1714530 (-) | 153 | WP_001788502.1 | hypothetical protein | - |
| QAO49_RS08765 (QAO49_08760) | - | 1714791..1714889 (-) | 99 | Protein_1686 | hypothetical protein | - |
| QAO49_RS08770 (QAO49_08765) | - | 1715036..1715167 (-) | 132 | WP_000247644.1 | hypothetical protein | - |
| QAO49_RS08775 (QAO49_08770) | - | 1715363..1716304 (-) | 942 | WP_000323493.1 | hypothetical protein | - |
| QAO49_RS08780 (QAO49_08775) | - | 1716309..1716938 (-) | 630 | WP_000742266.1 | hypothetical protein | - |
| QAO49_RS08785 (QAO49_08780) | - | 1716925..1717416 (-) | 492 | WP_000770704.1 | hypothetical protein | - |
| QAO49_RS08790 (QAO49_08785) | - | 1717873..1718442 (-) | 570 | WP_001293075.1 | terminase small subunit | - |
| QAO49_RS08795 (QAO49_08790) | - | 1718439..1718780 (-) | 342 | WP_000358778.1 | hypothetical protein | - |
| QAO49_RS08800 (QAO49_08795) | - | 1718783..1719310 (-) | 528 | WP_000771368.1 | spore coat protein | - |
| QAO49_RS08805 (QAO49_08800) | - | 1719361..1719579 (-) | 219 | WP_000448772.1 | capsid morphogenesis B protein | - |
| QAO49_RS08810 (QAO49_08805) | - | 1719597..1720175 (-) | 579 | WP_000846283.1 | hypothetical protein | - |
| QAO49_RS08815 (QAO49_08810) | - | 1720187..1720528 (-) | 342 | WP_001190615.1 | hypothetical protein | - |
| QAO49_RS08820 (QAO49_08815) | - | 1720876..1721517 (-) | 642 | WP_001019289.1 | hypothetical protein | - |
| QAO49_RS08825 (QAO49_08820) | - | 1721519..1721791 (-) | 273 | WP_001149387.1 | hypothetical protein | - |
| QAO49_RS08830 (QAO49_08825) | - | 1721778..1722581 (-) | 804 | WP_000148371.1 | bifunctional DNA primase/polymerase | - |
| QAO49_RS08835 (QAO49_08830) | - | 1722752..1724365 (-) | 1614 | WP_000344763.1 | hypothetical protein | - |
| QAO49_RS08840 (QAO49_08835) | tscT | 1724417..1724734 (-) | 318 | WP_001103938.1 | type II toxin-antitoxin system toxin TscT | - |
| QAO49_RS08845 (QAO49_08840) | tscA | 1724737..1724946 (-) | 210 | WP_001058486.1 | type II toxin-antitoxin system antitoxin TscA | - |
| QAO49_RS08850 (QAO49_08845) | - | 1724939..1725085 (-) | 147 | WP_031824147.1 | hypothetical protein | - |
| QAO49_RS08855 (QAO49_08850) | - | 1725097..1725369 (-) | 273 | WP_000091734.1 | helix-turn-helix domain-containing protein | - |
| QAO49_RS08860 (QAO49_08855) | - | 1725370..1725582 (-) | 213 | WP_000794656.1 | helix-turn-helix domain-containing protein | - |
| QAO49_RS08865 (QAO49_08860) | - | 1725726..1726421 (+) | 696 | WP_000668212.1 | helix-turn-helix domain-containing protein | - |
| QAO49_RS08870 (QAO49_08865) | - | 1726877..1728091 (+) | 1215 | WP_000270134.1 | tyrosine-type recombinase/integrase | - |
| QAO49_RS08875 (QAO49_08870) | - | 1728093..1728992 (+) | 900 | WP_001797289.1 | Abi family protein | - |
| QAO49_RS08880 (QAO49_08875) | rpsR | 1729231..1729473 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAO49_RS08885 (QAO49_08880) | ssbA | 1729525..1730028 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO49_RS08890 (QAO49_08885) | rpsF | 1730049..1730345 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QAO49_RS08895 (QAO49_08890) | - | 1730589..1730780 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| QAO49_RS08900 (QAO49_08895) | ychF | 1730866..1731963 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QAO49_RS08905 (QAO49_08900) | - | 1731975..1732178 (-) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| QAO49_RS08910 (QAO49_08905) | - | 1732208..1733089 (-) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| QAO49_RS08915 (QAO49_08910) | - | 1733246..1734091 (-) | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=819585 QAO49_RS08885 WP_000934799.1 1729525..1730028(-) (ssbA) [Staphylococcus aureus strain GE-MRSA18]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=819585 QAO49_RS08885 WP_000934799.1 1729525..1730028(-) (ssbA) [Staphylococcus aureus strain GE-MRSA18]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |