Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAY72_RS13565 | Genome accession | NZ_CP123132 |
| Coordinates | 2741594..2742064 (+) | Length | 156 a.a. |
| NCBI ID | WP_024937184.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain GE-MSSA28 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2736594..2747064
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY72_RS13525 (QAY72_13530) | - | 2736609..2736929 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| QAY72_RS13530 (QAY72_13535) | - | 2736926..2737087 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| QAY72_RS13535 (QAY72_13540) | - | 2737182..2737484 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| QAY72_RS13540 (QAY72_13545) | - | 2737489..2737749 (+) | 261 | WP_031824013.1 | DUF1108 family protein | - |
| QAY72_RS13545 (QAY72_13550) | - | 2737758..2738021 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAY72_RS13550 (QAY72_13555) | - | 2738030..2739973 (+) | 1944 | WP_411888961.1 | AAA family ATPase | - |
| QAY72_RS13555 (QAY72_13560) | - | 2739975..2740895 (+) | 921 | WP_000138481.1 | recombinase RecT | - |
| QAY72_RS13560 (QAY72_13565) | - | 2740976..2741593 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| QAY72_RS13565 (QAY72_13570) | ssbA | 2741594..2742064 (+) | 471 | WP_024937184.1 | single-stranded DNA-binding protein | Machinery gene |
| QAY72_RS13570 (QAY72_13575) | - | 2742094..2742978 (+) | 885 | WP_016047539.1 | DnaD domain protein | - |
| QAY72_RS13575 (QAY72_13580) | - | 2742985..2743203 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| QAY72_RS13580 (QAY72_13585) | - | 2743212..2743616 (+) | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAY72_RS13585 (QAY72_13590) | - | 2743629..2743997 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAY72_RS13590 (QAY72_13595) | - | 2744001..2744243 (+) | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| QAY72_RS13595 (QAY72_13600) | - | 2744308..2744757 (+) | 450 | WP_000982711.1 | YopX family protein | - |
| QAY72_RS13600 (QAY72_13605) | - | 2744754..2745263 (+) | 510 | WP_001105598.1 | hypothetical protein | - |
| QAY72_RS13605 (QAY72_13610) | - | 2745260..2745670 (+) | 411 | WP_000197967.1 | hypothetical protein | - |
| QAY72_RS13610 (QAY72_13615) | - | 2745663..2746199 (+) | 537 | WP_001066444.1 | dUTPase | - |
| QAY72_RS13615 (QAY72_13620) | - | 2746236..2746442 (+) | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| QAY72_RS13620 (QAY72_13625) | rinB | 2746439..2746588 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QAY72_RS13625 (QAY72_13630) | - | 2746588..2746788 (+) | 201 | WP_000265041.1 | DUF1514 family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17673.56 Da Isoelectric Point: 4.9628
>NTDB_id=819294 QAY72_RS13565 WP_024937184.1 2741594..2742064(+) (ssbA) [Staphylococcus aureus strain GE-MSSA28]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNTNDSQQDVYQQQVQQTRGQSQYPYNKPVKDNPFANANGPIEIDDDDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNTNDSQQDVYQQQVQQTRGQSQYPYNKPVKDNPFANANGPIEIDDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=819294 QAY72_RS13565 WP_024937184.1 2741594..2742064(+) (ssbA) [Staphylococcus aureus strain GE-MSSA28]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCAAAGAA
CACAAATGACTCTCAACAAGATGTATATCAACAACAAGTACAACAAACACGTGGGCAATCGCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTTGCAAATGCTAATGGTCCGATTGAAATAGATGACGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCAAAGAA
CACAAATGACTCTCAACAAGATGTATATCAACAACAAGTACAACAAACACGTGGGCAATCGCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTTGCAAATGCTAATGGTCCGATTGAAATAGATGACGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.353 |
100 |
0.571 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |