Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QAY78_RS00455 Genome accession   NZ_CP123128
Coordinates   81145..82188 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain GE-MSSA31     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 76145..87188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY78_RS00425 (QAY78_00420) - 76713..76822 (+) 110 Protein_84 hypothetical protein -
  QAY78_RS00430 (QAY78_00425) - 76851..77264 (+) 414 WP_001622129.1 hypothetical protein -
  QAY78_RS00435 (QAY78_00430) - 77442..78428 (-) 987 WP_000999713.1 FUSC family protein -
  QAY78_RS00440 (QAY78_00435) map 79071..79829 (+) 759 WP_000636137.1 type I methionyl aminopeptidase -
  QAY78_RS00445 (QAY78_00440) - 80046..80432 (+) 387 WP_001110184.1 hypothetical protein -
  QAY78_RS00450 (QAY78_00445) liaF 80447..81148 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  QAY78_RS00455 (QAY78_00450) vraS 81145..82188 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  QAY78_RS00460 (QAY78_00455) vraR 82178..82807 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  QAY78_RS00465 (QAY78_00460) - 82920..84137 (-) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  QAY78_RS00470 (QAY78_00465) - 84415..84690 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  QAY78_RS00475 (QAY78_00470) - 84697..85161 (-) 465 WP_000228668.1 low molecular weight protein-tyrosine-phosphatase -
  QAY78_RS00480 (QAY78_00475) - 85308..85508 (+) 201 WP_000180459.1 DUF1128 family protein -
  QAY78_RS00485 (QAY78_00480) - 85577..86767 (+) 1191 WP_411896787.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=819172 QAY78_RS00455 WP_001017131.1 81145..82188(+) (vraS) [Staphylococcus aureus strain GE-MSSA31]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=819172 QAY78_RS00455 WP_001017131.1 81145..82188(+) (vraS) [Staphylococcus aureus strain GE-MSSA31]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1