Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAY69_RS11805 | Genome accession | NZ_CP123091 |
| Coordinates | 2380426..2380929 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain MRSA-Mu50 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2376269..2424735 | 2380426..2380929 | within | 0 |
Gene organization within MGE regions
Location: 2376269..2424735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY69_RS11775 (QAY69_11760) | - | 2376366..2377211 (+) | 846 | WP_001557587.1 | ParB/RepB/Spo0J family partition protein | - |
| QAY69_RS11780 (QAY69_11765) | - | 2377365..2378246 (+) | 882 | WP_000373073.1 | mechanosensitive ion channel family protein | - |
| QAY69_RS11785 (QAY69_11770) | - | 2378276..2378479 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| QAY69_RS11790 (QAY69_11775) | ychF | 2378491..2379588 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QAY69_RS11795 (QAY69_11780) | - | 2379674..2379865 (-) | 192 | WP_001052484.1 | hypothetical protein | - |
| QAY69_RS11800 (QAY69_11785) | rpsF | 2380109..2380405 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QAY69_RS11805 (QAY69_11790) | ssbA | 2380426..2380929 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAY69_RS11810 (QAY69_11795) | rpsR | 2380981..2381223 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAY69_RS11815 (QAY69_11800) | - | 2381500..2382438 (-) | 939 | WP_001817700.1 | Abi family protein | - |
| QAY69_RS11820 (QAY69_11805) | - | 2382477..2383190 (-) | 714 | Protein_2303 | tyrosine-type recombinase/integrase | - |
| QAY69_RS11825 (QAY69_11810) | selX | 2383396..2384007 (+) | 612 | WP_000475325.1 | staphylococcal enterotoxin-like toxin X | - |
| QAY69_RS11830 (QAY69_11815) | - | 2384376..2384744 (+) | 369 | WP_000849163.1 | YxeA family protein | - |
| QAY69_RS11835 (QAY69_11820) | - | 2384925..2385497 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| QAY69_RS11840 (QAY69_11825) | - | 2385634..2385897 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAY69_RS11845 (QAY69_11830) | - | 2386197..2386448 (+) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| QAY69_RS11850 (QAY69_11835) | - | 2386487..2386696 (-) | 210 | WP_000211677.1 | hypothetical protein | - |
| QAY69_RS11855 (QAY69_11840) | - | 2386874..2387455 (+) | 582 | WP_000158375.1 | histidine phosphatase family protein | - |
| QAY69_RS11860 (QAY69_11845) | - | 2387521..2387904 (-) | 384 | WP_000868259.1 | hypothetical protein | - |
| QAY69_RS11865 (QAY69_11850) | - | 2388174..2388800 (-) | 627 | WP_000746679.1 | NDxxF motif lipoprotein | - |
| QAY69_RS11870 (QAY69_11855) | - | 2388873..2389108 (-) | 236 | Protein_2313 | hypothetical protein | - |
| QAY69_RS11875 (QAY69_11860) | ahpF | 2389244..2390767 (-) | 1524 | WP_000930514.1 | alkyl hydroperoxide reductase subunit F | - |
| QAY69_RS11880 (QAY69_11865) | ahpC | 2390783..2391352 (-) | 570 | WP_000052781.1 | alkyl hydroperoxide reductase subunit C | - |
| QAY69_RS11885 (QAY69_11870) | nfsA | 2391844..2392599 (+) | 756 | WP_001287099.1 | oxygen-insensitive NADPH nitroreductase | - |
| QAY69_RS11890 (QAY69_11875) | - | 2392679..2394067 (-) | 1389 | WP_000991018.1 | L-cystine transporter | - |
| QAY69_RS11895 (QAY69_11880) | - | 2394152..2394250 (+) | 99 | WP_001792089.1 | hypothetical protein | - |
| QAY69_RS11900 (QAY69_11885) | - | 2394914..2396233 (+) | 1320 | WP_001557163.1 | ISL3-like element IS1181 family transposase | - |
| QAY69_RS11905 | - | 2396281..2396352 (+) | 72 | WP_370591525.1 | hypothetical protein | - |
| QAY69_RS11910 (QAY69_11895) | - | 2396565..2397521 (-) | 957 | WP_000956137.1 | hypothetical protein | - |
| QAY69_RS11915 (QAY69_11900) | - | 2397639..2398301 (-) | 663 | WP_000394690.1 | hypothetical protein | - |
| QAY69_RS11920 (QAY69_11905) | - | 2398444..2398851 (-) | 408 | WP_000763767.1 | general stress protein | - |
| QAY69_RS11925 (QAY69_11910) | xpt | 2399364..2399942 (+) | 579 | WP_000421410.1 | xanthine phosphoribosyltransferase | - |
| QAY69_RS11930 (QAY69_11915) | pbuX | 2399942..2401210 (+) | 1269 | WP_000793018.1 | xanthine permease PbuX | - |
| QAY69_RS11935 (QAY69_11920) | guaB | 2401248..2402714 (+) | 1467 | WP_000264071.1 | IMP dehydrogenase | - |
| QAY69_RS11940 (QAY69_11925) | guaA | 2402739..2404280 (+) | 1542 | WP_000424963.1 | glutamine-hydrolyzing GMP synthase | - |
| QAY69_RS11945 (QAY69_11930) | - | 2404348..2405541 (-) | 1194 | WP_000237797.1 | site-specific integrase | - |
| QAY69_RS11950 (QAY69_11935) | - | 2405568..2405768 (-) | 201 | WP_000633907.1 | DUF3173 family protein | - |
| QAY69_RS11955 (QAY69_11940) | - | 2406266..2406496 (-) | 231 | WP_000845143.1 | helix-turn-helix domain-containing protein | - |
| QAY69_RS11960 (QAY69_11945) | - | 2406493..2406915 (-) | 423 | WP_000804879.1 | RNA polymerase sigma factor | - |
| QAY69_RS11965 (QAY69_11950) | - | 2407446..2407799 (+) | 354 | WP_001227350.1 | helix-turn-helix domain-containing protein | - |
| QAY69_RS11970 (QAY69_11955) | - | 2407857..2408023 (-) | 167 | Protein_2333 | cysteine-rich KTR domain-containing protein | - |
| QAY69_RS11975 (QAY69_11960) | tet(M) | 2408142..2410061 (-) | 1920 | WP_000691737.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| QAY69_RS11980 | - | 2410077..2410124 (-) | 48 | Protein_2335 | hypothetical protein | - |
| QAY69_RS11985 (QAY69_11970) | - | 2410438..2411367 (-) | 930 | WP_000584387.1 | conjugal transfer protein | - |
| QAY69_RS11990 (QAY69_11975) | - | 2411384..2412406 (-) | 1023 | WP_000768373.1 | bifunctional lytic transglycosylase/C40 family peptidase | - |
| QAY69_RS11995 (QAY69_11980) | - | 2412403..2414430 (-) | 2028 | WP_000192393.1 | CD3337/EF1877 family mobilome membrane protein | - |
| QAY69_RS12000 (QAY69_11985) | - | 2414427..2416880 (-) | 2454 | WP_000331165.1 | ATP-binding protein | - |
| QAY69_RS12005 (QAY69_11990) | - | 2416864..2417259 (-) | 396 | WP_000723887.1 | conjugal transfer protein | - |
| QAY69_RS12010 (QAY69_11995) | - | 2417331..2417969 (-) | 639 | WP_000248477.1 | DUF6037 family protein | - |
| QAY69_RS12015 (QAY69_12000) | - | 2418025..2418525 (-) | 501 | WP_000425404.1 | antirestriction protein ArdA | - |
| QAY69_RS12020 (QAY69_12005) | - | 2418586..2419365 (-) | 780 | WP_000675717.1 | abortive infection family protein | - |
| QAY69_RS12025 (QAY69_12010) | - | 2419407..2419628 (-) | 222 | WP_001009054.1 | hypothetical protein | - |
| QAY69_RS12030 (QAY69_12015) | - | 2419625..2419915 (-) | 291 | WP_000055376.1 | hypothetical protein | - |
| QAY69_RS12035 (QAY69_12020) | mobT | 2419912..2421096 (-) | 1185 | WP_000426689.1 | MobT family relaxase | - |
| QAY69_RS12040 (QAY69_12025) | - | 2421278..2422681 (-) | 1404 | WP_001130244.1 | FtsK/SpoIIIE domain-containing protein | - |
| QAY69_RS12045 (QAY69_12030) | - | 2422703..2423476 (-) | 774 | WP_000185761.1 | hypothetical protein | - |
| QAY69_RS12050 (QAY69_12035) | - | 2423486..2423863 (-) | 378 | WP_001234191.1 | YdcP family protein | - |
| QAY69_RS12055 (QAY69_12040) | - | 2423884..2424198 (-) | 315 | WP_000421279.1 | YdcP family protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=818532 QAY69_RS11805 WP_000934799.1 2380426..2380929(+) (ssbA) [Staphylococcus aureus strain MRSA-Mu50]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=818532 QAY69_RS11805 WP_000934799.1 2380426..2380929(+) (ssbA) [Staphylococcus aureus strain MRSA-Mu50]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |