Detailed information NTG0817679

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: LLUL033_RS07050
• Genome accession: NZ_CP122980
• Coordinates: 1392770..1393420 (+)
• Length: 216 a.a.
• NCBI ID: WP_011835333.1
• Uniprot ID: A2RL95
• Organism: Lactococcus cremoris strain UL033
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1387770..1398420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUL033_RS07025 (LLUL033_07015)	-	1388282..1389049 (-)	768	WP_011835328.1	5'-nucleotidase	-
LLUL033_RS07030 (LLUL033_07020)	-	1389159..1390178 (-)	1020	WP_011835329.1	DUF475 domain-containing protein	-
LLUL033_RS07035 (LLUL033_07025)	-	1390244..1390744 (-)	501	WP_011835330.1	VanZ family protein	-
LLUL033_RS07040 (LLUL033_07030)	-	1390786..1391421 (-)	636	WP_011835331.1	YigZ family protein	-
LLUL033_RS07045 (LLUL033_07035)	comFA	1391478..1392770 (+)	1293	WP_259691956.1	DEAD/DEAH box helicase	Machinery gene
LLUL033_RS07050 (LLUL033_07040)	comFC	1392770..1393420 (+)	651	WP_011835333.1	ComF family protein	Machinery gene
LLUL033_RS07055 (LLUL033_07045)	-	1393479..1394057 (-)	579	WP_011835334.1	nucleotidyltransferase family protein	-
LLUL033_RS07060 (LLUL033_07050)	-	1394074..1394529 (-)	456	WP_011676094.1	diacylglycerol kinase family protein	-
LLUL033_RS07065 (LLUL033_07055)	ybeY	1394513..1395001 (-)	489	WP_011835335.1	rRNA maturation RNase YbeY	-
LLUL033_RS07070 (LLUL033_07060)	-	1395231..1395719 (-)	489	WP_259687581.1	NUDIX hydrolase	-
LLUL033_RS07075 (LLUL033_07065)	-	1395789..1396757 (-)	969	WP_011835337.1	PhoH family protein	-
LLUL033_RS07080 (LLUL033_07070)	-	1396831..1398363 (-)	1533	WP_011835338.1	Nramp family divalent metal transporter	-

Sequence

Protein

• Length: 216 a.a.
• Molecular weight: 25289.60 Da
• Isoelectric Point: 9.8464

>NTDB_id=817679 LLUL033_RS07050 WP_011835333.1 1392770..1393420(+) (comFC) [Lactococcus cremoris strain UL033]
MQTCLLCSRIIKQTLTFSEFFLLKNKRNLICNKCQSLFKKIPNERCPRCSKSNSKGICADCLRWEEKGIIVNHQAIFIYN
QEMKDYFSLYKFMGDYRLHEVFDSYFKNLSKKIPLVPIPVSPKRLQERGFNQVTAFLKDRTYLDLLEKEDTVSQSSLNRE
GRLSTTNPFKLKEGEKIPKKIILIDDIYTTGTTFYHAIKTLKKANPIEITTFSLCR

Nucleotide

• Length: 651 bp

>NTDB_id=817679 LLUL033_RS07050 WP_011835333.1 1392770..1393420(+) (comFC) [Lactococcus cremoris strain UL033]
ATGCAAACATGTCTGCTTTGTTCCAGAATTATCAAACAAACACTCACTTTTAGTGAATTCTTTTTACTAAAGAATAAGAG
AAATTTAATATGCAATAAATGCCAATCACTGTTTAAAAAAATTCCTAACGAACGTTGTCCTCGTTGCTCTAAATCTAACT
CTAAAGGTATATGTGCTGACTGTCTCAGGTGGGAAGAAAAAGGAATCATTGTTAATCATCAGGCAATTTTTATTTATAAC
CAAGAAATGAAGGATTACTTTAGTCTTTACAAATTTATGGGAGATTATCGATTACACGAAGTCTTCGATTCCTATTTTAA
AAATTTGTCCAAAAAAATTCCTCTGGTTCCTATTCCGGTTTCTCCTAAAAGATTACAAGAAAGAGGGTTTAACCAAGTAA
CAGCTTTTCTAAAAGATAGAACTTATCTTGATTTGCTTGAAAAAGAGGATACTGTCAGCCAATCAAGTCTTAATCGCGAG
GGACGTTTATCAACTACCAATCCTTTTAAGTTGAAAGAGGGTGAAAAAATACCCAAAAAAATCATTTTGATTGATGATAT
TTATACAACTGGAACTACTTTTTATCATGCTATAAAAACCTTAAAGAAAGCTAATCCGATTGAAATTACAACTTTCTCAC
TCTGCCGTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A2RL95

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Lactococcus lactis subsp. cremoris KW2	98.507	62.037	0.611
comFC/cflB	Streptococcus mitis NCTC 12261	49.541	100	0.5
comFC/cflB	Streptococcus pneumoniae Rx1	47.706	100	0.481
comFC/cflB	Streptococcus pneumoniae D39	47.706	100	0.481
comFC/cflB	Streptococcus pneumoniae R6	47.706	100	0.481
comFC/cflB	Streptococcus pneumoniae TIGR4	47.706	100	0.481
comFC/cflB	Streptococcus mitis SK321	47.706	100	0.481
comFC	Bacillus subtilis subsp. subtilis str. 168	34.361	100	0.361