Detailed information NTG0081490

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: YZOS03_RS02670
• Genome accession: NZ_AP023185
• Coordinates: 556028..557071 (+)
• Length: 347 a.a.
• NCBI ID: WP_005380874.1
• Uniprot ID: A0A2I3C9C1
• Organism: Vibrio alginolyticus strain YZOS-03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 551028..562071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YZOS03_RS02655 (YZOS03_04550)	rpoS	551631..552617 (+)	987	WP_064368766.1	RNA polymerase sigma factor RpoS	Regulator
YZOS03_RS02660 (YZOS03_04560)	mutS	552699..555260 (-)	2562	WP_005380877.1	DNA mismatch repair protein MutS	-
YZOS03_RS02665 (YZOS03_04570)	pncC	555345..555827 (+)	483	WP_017633544.1	nicotinamide-nucleotide amidase	-
YZOS03_RS02670 (YZOS03_04580)	recA	556028..557071 (+)	1044	WP_005380874.1	recombinase RecA	Machinery gene
YZOS03_RS02675 (YZOS03_04590)	recX	557199..557666 (+)	468	WP_005383799.1	recombination regulator RecX	-
YZOS03_RS02680 (YZOS03_04600)	alaS	557809..560391 (+)	2583	WP_005383801.1	alanine--tRNA ligase	-
YZOS03_RS02685 (YZOS03_04610)	-	560604..561791 (+)	1188	WP_005383803.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37290.75 Da
• Isoelectric Point: 5.0618

>NTDB_id=81490 YZOS03_RS02670 WP_005380874.1 556028..557071(+) (recA) [Vibrio alginolyticus strain YZOS-03]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELVDLGVKHKLVEKAGAWYSYNGDKIGQGKANACNYLREHPEVAKTIDT
KLREMLLAPALAEAPEAGEAPEQAEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=81490 YZOS03_RS02670 WP_005380874.1 556028..557071(+) (recA) [Vibrio alginolyticus strain YZOS-03]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGACGTAGAAACCATCTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTAGAAATCTACGGCCCAGAATCTTCAGGTAAAACAACATTAACGCTTGAGCTTATTGCT
GCTGCGCAACGTGAAGGCAAAACGTGTGCGTTTATCGATGCAGAGCACGCTCTAGATCCTGTATACGCGAAGAAACTTGG
CGTAGATATCGATGCATTGCTAGTTTCTCAGCCAGACACAGGTGAGCAAGCGCTAGAGATCTGTGACGCACTTGCACGTT
CTGGTGCTATCGATGTTATGGTTGTCGACTCTGTTGCAGCGCTAACACCGAAAGCAGAAATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTGCAAGCACGTATGCTTTCTCAAGCAATGCGTAAGCTAACGGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACAACAACAGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGTGACGAAGTCGTAGGTAACGAA
ACGCGCATCAAAGTTGTTAAGAATAAGATTGCAGCACCATTTAAAGAAGCAAACACACAAATCATGTACGGCCAAGGCTT
TAACCGCGAAGGTGAACTTGTCGATCTAGGTGTGAAGCACAAGTTAGTTGAAAAAGCCGGTGCTTGGTATAGCTACAATG
GCGATAAGATTGGTCAAGGTAAAGCGAATGCGTGTAACTACCTGCGTGAGCACCCTGAAGTGGCTAAAACTATCGATACA
AAACTGCGTGAAATGTTGCTAGCGCCAGCACTTGCGGAAGCGCCTGAAGCTGGTGAAGCGCCAGAGCAAGCTGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A2I3C9C1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	95.137	94.813	0.902
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.137	94.813	0.902
recA	Acinetobacter baylyi ADP1	71.594	99.424	0.712
recA	Acinetobacter baumannii D1279779	74.924	94.236	0.706
recA	Pseudomonas stutzeri DSM 10701	74.618	94.236	0.703
recA	Glaesserella parasuis strain SC1401	70.679	93.372	0.66
recA	Neisseria gonorrhoeae MS11	65.33	100	0.657
recA	Neisseria gonorrhoeae MS11	65.33	100	0.657
recA	Neisseria gonorrhoeae strain FA1090	65.33	100	0.657
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.625	0.637
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.475	98.847	0.588
recA	Helicobacter pylori strain NCTC11637	61.774	94.236	0.582
recA	Streptococcus pneumoniae R6	62.539	93.084	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	93.084	0.582
recA	Streptococcus pneumoniae D39	62.539	93.084	0.582
recA	Streptococcus pneumoniae Rx1	62.539	93.084	0.582
recA	Helicobacter pylori 26695	61.468	94.236	0.579
recA	Streptococcus mitis SK321	61.92	93.084	0.576
recA	Latilactobacillus sakei subsp. sakei 23K	59.88	96.254	0.576
recA	Streptococcus pyogenes NZ131	61.538	93.66	0.576
recA	Bacillus subtilis subsp. subtilis str. 168	61.994	92.507	0.573
recA	Streptococcus mitis NCTC 12261	61.61	93.084	0.573
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.682	92.507	0.571
recA	Lactococcus lactis subsp. cremoris KW2	60.991	93.084	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.159	95.965	0.568