Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P8P68_RS07130 Genome accession   NZ_CP121467
Coordinates   1454759..1455517 (-) Length   252 a.a.
NCBI ID   WP_049478005.1    Uniprot ID   A0AAX3THD5
Organism   Streptococcus sp. D7B5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449759..1460517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS07105 (P8P68_07105) pth 1449785..1450354 (-) 570 WP_278275812.1 aminoacyl-tRNA hydrolase -
  P8P68_RS07110 (P8P68_07110) ychF 1450427..1451542 (-) 1116 WP_001218702.1 redox-regulated ATPase YchF -
  P8P68_RS07115 (P8P68_07115) - 1451627..1451821 (-) 195 WP_000285184.1 DUF951 family protein -
  P8P68_RS07120 (P8P68_07120) dnaN 1451886..1453022 (-) 1137 WP_000581146.1 DNA polymerase III subunit beta -
  P8P68_RS07125 (P8P68_07125) dnaA 1453181..1454542 (-) 1362 WP_000660625.1 chromosomal replication initiator protein DnaA -
  P8P68_RS07130 (P8P68_07130) spo0J 1454759..1455517 (-) 759 WP_049478005.1 ParB/RepB/Spo0J family partition protein Regulator
  P8P68_RS07135 (P8P68_07135) htrA 1455575..1456771 (-) 1197 WP_042903085.1 S1C family serine protease Regulator
  P8P68_RS07140 (P8P68_07140) rlmH 1456957..1457436 (+) 480 WP_042903084.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P8P68_RS07150 (P8P68_07150) comC/comC2 1457718..1457843 (+) 126 WP_000799678.1 competence-stimulating peptide ComC Regulator
  P8P68_RS07155 (P8P68_07155) comD 1457864..1459183 (+) 1320 WP_049490808.1 competence system sensor histidine kinase ComD Regulator
  P8P68_RS07160 (P8P68_07160) comE 1459180..1459932 (+) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29039.51 Da        Isoelectric Point: 8.2829

>NTDB_id=812241 P8P68_RS07130 WP_049478005.1 1454759..1455517(-) (spo0J) [Streptococcus sp. D7B5]
MEKFEMISISEIQKNPYQPRKEFDADKIKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=812241 P8P68_RS07130 WP_049478005.1 1454759..1455517(-) (spo0J) [Streptococcus sp. D7B5]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGCAGATAA
AATAAAGGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTAGCTGGTCTTACTTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAATCTATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCGGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTAGACAAAGAGCAGCAAGACTATTTCTTTCAACTAATTAAAAATGAAGACATCTCTGTGAGAAA
GTTGGAAGCACTACTGACAGAAAAAAAACACAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGATGAAGAAGATAAAT
TAAAAAAACTACTAGGTTTAAGTGTAGAAATTAAACTTTCTAAAAAAGATACAGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504