Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   P7F70_RS10380 Genome accession   NZ_CP121201
Coordinates   2070717..2071865 (+) Length   382 a.a.
NCBI ID   WP_218653843.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP28     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2065717..2076865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS10360 (P7F70_10365) - 2066930..2069524 (+) 2595 WP_278024775.1 YfhO family protein -
  P7F70_RS10375 (P7F70_10380) rlmH 2069937..2070416 (-) 480 WP_278024776.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P7F70_RS10380 (P7F70_10385) htrA 2070717..2071865 (+) 1149 WP_218653843.1 trypsin-like peptidase domain-containing protein Regulator
  P7F70_RS10385 (P7F70_10390) spo0J 2071919..2072686 (+) 768 WP_278024777.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 382 a.a.        Molecular weight: 40671.25 Da        Isoelectric Point: 4.4215

>NTDB_id=811022 P7F70_RS10380 WP_218653843.1 2070717..2071865(+) (htrA) [Streptococcus pluranimalium strain SP28]
MAGAYLMLYFSNNLSTPLNNSQSKAKTSNVVYNNTTNTTKAAKKVQDAVVSVINYQKNADSSLNNLYSQLFGGDNDKRSE
DDLSVYSEGSGVIYRKEGGSAYIVTNNHVIDGAENIEIMLADGTKVVGELVGSDTYSDLAVVKISDEKVSTVAKFADSDK
LNVGEVAIAMGSPLGSEYANSVTQGIVSSLSRTVTLKNEEGETISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKIS
STSTAREAVEGMGFAIPSNDVIKIINQLEKNGQVTRPALGIFMANLSDLSTSAISELNIPNKLTGGIVVATVQDNMPASG
KLKQYDVITEIDGEEITSTSDLQSILYDHEIGDTIKITYYRGKDKQTTDIKLSKSTQDLENR

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=811022 P7F70_RS10380 WP_218653843.1 2070717..2071865(+) (htrA) [Streptococcus pluranimalium strain SP28]
ATGGCAGGAGCTTATCTCATGCTCTATTTTTCCAATAACCTGTCAACTCCTTTGAATAATTCGCAATCCAAAGCCAAAAC
AAGCAATGTGGTTTACAATAATACTACCAACACGACCAAAGCAGCCAAAAAAGTCCAAGATGCTGTTGTATCAGTTATTA
ACTACCAAAAGAATGCCGATTCTTCTTTAAATAATCTTTATAGTCAACTGTTTGGTGGAGACAATGATAAGCGTTCTGAA
GATGATTTGAGTGTCTACAGCGAAGGCTCTGGCGTTATTTATCGAAAAGAAGGTGGATCAGCTTACATCGTCACTAACAA
TCACGTTATTGATGGAGCTGAAAATATTGAAATTATGCTTGCTGATGGAACAAAAGTCGTCGGAGAACTTGTTGGATCTG
ATACTTACTCCGATTTAGCTGTTGTCAAAATTTCTGATGAAAAAGTATCTACAGTTGCGAAGTTCGCAGACTCTGATAAA
TTAAACGTTGGAGAAGTAGCGATTGCAATGGGTAGCCCTCTAGGAAGTGAATATGCTAACTCTGTTACACAAGGGATTGT
GTCAAGTCTAAGCCGTACAGTAACGCTTAAAAATGAGGAGGGTGAAACCATTTCAACCAATGCTATCCAAACAGATGCTG
CCATCAATCCTGGTAACTCTGGTGGTGCTTTGATTAATATTGAAGGACAAGTTATTGGTATCAATTCAAGTAAAATCTCA
TCTACCTCAACTGCTCGCGAAGCCGTAGAAGGCATGGGATTTGCTATCCCATCTAATGATGTCATCAAAATAATCAACCA
GTTAGAAAAAAATGGACAAGTCACTCGCCCAGCACTAGGCATCTTTATGGCGAATCTTAGCGATCTCTCAACAAGTGCTA
TCTCAGAGCTTAATATTCCAAATAAGCTCACTGGAGGTATTGTTGTTGCCACTGTTCAAGATAACATGCCTGCCTCAGGT
AAACTGAAACAATATGATGTCATCACTGAAATTGATGGTGAAGAAATAACATCAACCAGTGATCTACAAAGTATTCTTTA
TGATCACGAAATTGGTGATACGATTAAAATCACCTACTACCGTGGTAAAGATAAGCAGACCACTGACATTAAGTTAAGCA
AGTCAACACAAGATTTAGAAAACCGCTAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(89-234)

PDZ domain (PDZ_2)

(277-372)

Peptidase family M50 (Peptidase_M50)

(228-376)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

66.31

97.906

0.649
  htrA Streptococcus gordonii str. Challis substr. CH1

59.211

99.476

0.589
  htrA Streptococcus pneumoniae D39

64.183

91.361

0.586
  htrA Streptococcus pneumoniae TIGR4

64.183

91.361

0.586
  htrA Streptococcus mitis NCTC 12261

64.183

91.361

0.586
  htrA Streptococcus pneumoniae R6

64.183

91.361

0.586
  htrA Streptococcus pneumoniae Rx1

64.183

91.361

0.586