Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   P7F70_RS07050 Genome accession   NZ_CP121201
Coordinates   1403245..1405395 (+) Length   716 a.a.
NCBI ID   WP_278023860.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP28     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 1398245..1410395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS07005 (P7F70_07010) - 1399372..1400052 (-) 681 WP_278023848.1 type II CAAX endopeptidase family protein -
  P7F70_RS07010 (P7F70_07015) - 1400063..1400191 (-) 129 WP_278023849.1 hypothetical protein -
  P7F70_RS07015 (P7F70_07020) - 1400311..1400979 (-) 669 WP_278023851.1 CPBP family intramembrane glutamic endopeptidase -
  P7F70_RS07020 (P7F70_07025) - 1400976..1401203 (-) 228 WP_278023852.1 hypothetical protein -
  P7F70_RS07025 (P7F70_07030) - 1401533..1401679 (-) 147 WP_278023853.1 hypothetical protein -
  P7F70_RS07030 (P7F70_07035) - 1401693..1401845 (-) 153 WP_278023854.1 hypothetical protein -
  P7F70_RS07035 (P7F70_07040) - 1401882..1402595 (-) 714 WP_278023856.1 CPBP family intramembrane glutamic endopeptidase -
  P7F70_RS07040 (P7F70_07045) - 1402605..1402790 (-) 186 WP_278023858.1 hypothetical protein -
  P7F70_RS07045 (P7F70_07050) - 1402811..1403017 (-) 207 WP_278023859.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  P7F70_RS07050 (P7F70_07055) comA/nlmT 1403245..1405395 (+) 2151 WP_278023860.1 peptide cleavage/export ABC transporter Regulator
  P7F70_RS07055 (P7F70_07060) - 1405405..1406730 (+) 1326 WP_278023861.1 HlyD family efflux transporter periplasmic adaptor subunit -
  P7F70_RS07060 (P7F70_07065) - 1406880..1407014 (+) 135 WP_278023862.1 bacteriocin -
  P7F70_RS07065 (P7F70_07070) - 1407011..1408345 (-) 1335 WP_278023863.1 GHKL domain-containing protein -
  P7F70_RS07070 (P7F70_07075) - 1408342..1409085 (-) 744 WP_278023865.1 response regulator transcription factor -
  P7F70_RS07075 (P7F70_07080) - 1409362..1409763 (+) 402 WP_278023866.1 hypothetical protein -

Sequence


Protein


Download         Length: 716 a.a.        Molecular weight: 79944.87 Da        Isoelectric Point: 7.9433

>NTDB_id=811002 P7F70_RS07050 WP_278023860.1 1403245..1405395(+) (comA/nlmT) [Streptococcus pluranimalium strain SP28]
MSRYKRTFIPQVDARDCGVAALASIAAFYGSRYSLAHLRELAKTNKEGTTALGLVRAAQEIDFETRAIQADASLFEMDDV
PYPFIAHVNKEGKLQHYYVVYQAGKKGLVIGDPDPSVKVTKMSYDAFLSEWTGVALFMGPKPSYKPHKDKKNGLTSFLPL
IFKQKAVISQIVIASLLVTIINIVGSYYLQSILDDYIPNHMLSTLGIISVGLIVTYVIQQVMTFARDYLLTVLSQRLTID
VILSYIKHIFDLPMSFFATRRTGEITSRFTDATAIIDALASTILSLFLDFSIVVIVGGVLLLQNPHLFSLSLVSIPIYLV
IIFAFMKPFERMNNDVMQSNAMVSSAIIEDINGIETIKSLTSEEVRYQKIDREFVDYLDKSFILSKLSTLQSALKQGAQL
ILNVLILWLGSRLVIQGKISVGQLITFNTLLSYFTDPLENIINLQTKLQSAKVANTRLNEVYLVDSEFKDNTFETDARML
NGDIIFDHVSYKFGFGRDTLSDISLTINEKTKVALVGISGSGKTTLAKMIVNFYEPYQGTIRVNGNDLKTLNKKVLRRHI
NYLPQQAYIFDGSILDNLTLGVQEGISQKDIIRACEIAEIRQDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSSLDVLTEKKVIDNLLALDKTIILVAHRLSIAQRAEKILVLDQGKVVEEGSHSDLVRRQGFYYHLFSK

Nucleotide


Download         Length: 2151 bp        

>NTDB_id=811002 P7F70_RS07050 WP_278023860.1 1403245..1405395(+) (comA/nlmT) [Streptococcus pluranimalium strain SP28]
ATGTCAAGATACAAACGAACCTTTATCCCTCAGGTTGATGCTAGAGATTGTGGGGTGGCAGCTTTGGCTTCTATTGCTGC
TTTTTATGGGTCTAGGTACTCACTCGCTCATTTGAGAGAACTTGCTAAAACCAATAAGGAGGGCACTACTGCTCTTGGTC
TTGTCAGGGCTGCTCAAGAAATCGACTTTGAGACACGAGCCATCCAAGCGGATGCTAGTCTCTTTGAAATGGATGATGTT
CCCTATCCTTTCATCGCCCATGTCAATAAGGAAGGAAAACTACAACACTACTATGTTGTCTATCAGGCTGGCAAGAAAGG
GCTAGTCATTGGTGATCCTGATCCTAGTGTCAAAGTCACTAAAATGTCCTACGATGCCTTCCTTTCTGAATGGACTGGTG
TTGCCTTATTTATGGGACCTAAACCATCCTACAAGCCCCATAAGGATAAAAAGAATGGCTTGACCAGTTTTCTGCCACTC
ATTTTTAAGCAGAAAGCTGTTATTAGTCAGATTGTCATTGCTAGCCTCCTTGTGACCATCATTAACATTGTTGGTTCTTA
TTATTTACAATCCATTTTAGATGATTATATTCCCAATCATATGCTCTCCACGCTTGGGATTATTTCTGTTGGCTTGATTG
TGACTTATGTTATCCAACAAGTGATGACCTTTGCCAGGGATTATCTGCTTACTGTGCTTAGTCAGCGCTTGACCATTGAT
GTTATTTTATCTTATATCAAGCACATTTTTGACCTTCCCATGTCTTTTTTTGCGACTAGACGTACTGGTGAAATCACCTC
ACGCTTTACAGATGCCACTGCTATCATTGATGCTTTAGCATCCACTATTCTGTCTCTTTTCCTAGACTTTTCAATTGTCG
TCATTGTCGGCGGGGTCTTGTTACTTCAAAACCCTCATCTTTTCTCACTGTCACTCGTTTCTATTCCAATCTATCTTGTC
ATTATTTTTGCCTTCATGAAACCTTTTGAACGGATGAATAACGATGTGATGCAAAGTAATGCCATGGTCAGTTCAGCCAT
TATTGAGGATATCAATGGGATTGAGACGATTAAATCATTAACCAGTGAGGAAGTGCGTTACCAAAAGATTGACCGTGAGT
TTGTGGATTATCTCGATAAATCTTTCATTTTAAGCAAACTCTCTACTCTTCAGTCCGCTTTGAAGCAAGGCGCTCAACTC
ATTCTCAACGTCCTCATCCTTTGGTTAGGGTCAAGACTTGTGATTCAAGGAAAAATCTCCGTTGGTCAACTCATTACTTT
TAACACCTTGTTAAGCTATTTTACGGATCCTTTAGAAAACATCATTAACCTCCAAACCAAGTTACAATCTGCAAAAGTTG
CCAATACCCGCCTCAATGAAGTTTACCTAGTTGATTCTGAATTTAAAGACAACACCTTTGAAACGGATGCTAGGATGCTT
AATGGCGATATCATTTTTGATCACGTTTCTTATAAATTTGGTTTTGGACGCGATACCTTATCTGATATTTCCCTTACCAT
CAACGAAAAAACAAAAGTTGCTCTGGTGGGCATTAGTGGTTCTGGTAAAACAACTCTCGCTAAAATGATTGTCAATTTTT
ATGAGCCTTATCAGGGAACGATTCGAGTGAATGGTAACGATCTTAAAACACTCAATAAGAAAGTGCTACGGCGCCATATT
AACTACCTGCCTCAGCAAGCCTATATTTTTGATGGCTCTATCCTTGATAATCTGACCTTAGGAGTTCAAGAAGGGATTAG
CCAAAAAGACATTATAAGAGCTTGTGAGATTGCCGAAATTCGTCAGGATATTGAACAAATGCCTATGGGCTATCAAACGG
AGTTATCAGATGGCGCAGGCTTATCCGGTGGACAGAAACAACGCATTGCCCTAGCACGTGCCTTACTCACAAAGGCACCA
GTACTCATTCTCGACGAAGCGACAAGTAGCTTGGATGTTCTCACAGAGAAAAAAGTCATTGACAACCTCTTAGCCCTTGA
TAAAACCATTATCCTTGTGGCGCACCGCCTCAGCATTGCTCAACGAGCTGAGAAAATCCTTGTCTTAGACCAAGGCAAAG
TTGTAGAAGAAGGCTCCCATAGCGATTTGGTGAGACGCCAAGGCTTTTATTATCATTTATTTAGTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

70.168

99.721

0.7

  comA Streptococcus mitis NCTC 12261

67.183

99.162

0.666

  comA Streptococcus mitis SK321

66.62

99.162

0.661

  comA Streptococcus pneumoniae Rx1

66.62

99.162

0.661

  comA Streptococcus pneumoniae D39

66.62

99.162

0.661

  comA Streptococcus pneumoniae R6

66.62

99.162

0.661

  comA Streptococcus pneumoniae TIGR4

66.338

99.162

0.658

  comA Streptococcus gordonii str. Challis substr. CH1

64.566

99.721

0.644