Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   P7F70_RS01490 Genome accession   NZ_CP121201
Coordinates   280268..281317 (+) Length   349 a.a.
NCBI ID   WP_115129656.1    Uniprot ID   A0A345VHP8
Organism   Streptococcus pluranimalium strain SP28     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 275268..286317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS01475 (P7F70_01475) amiA 275795..277768 (+) 1974 WP_278024928.1 peptide ABC transporter substrate-binding protein Regulator
  P7F70_RS01480 (P7F70_01480) amiC 277834..279333 (+) 1500 WP_278024929.1 ABC transporter permease Regulator
  P7F70_RS01485 (P7F70_01485) amiD 279333..280259 (+) 927 WP_115129655.1 oligopeptide ABC transporter permease OppC Regulator
  P7F70_RS01490 (P7F70_01490) amiE 280268..281317 (+) 1050 WP_115129656.1 ABC transporter ATP-binding protein Regulator
  P7F70_RS01495 (P7F70_01495) amiF 281332..282261 (+) 930 WP_104967232.1 ATP-binding cassette domain-containing protein Regulator
  P7F70_RS01500 (P7F70_01500) - 282563..284224 (+) 1662 WP_278024930.1 peptide ABC transporter substrate-binding protein -
  P7F70_RS01505 (P7F70_01505) - 284339..285253 (+) 915 WP_278024931.1 ABC transporter permease -
  P7F70_RS01510 (P7F70_01510) - 285264..286295 (+) 1032 WP_278024932.1 ABC transporter permease -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 38535.35 Da        Isoelectric Point: 5.6967

>NTDB_id=810982 P7F70_RS01490 WP_115129656.1 280268..281317(+) (amiE) [Streptococcus pluranimalium strain SP28]
MKKTDNIILSAKDVVVEFDVRDRVLTAIRGVSLDLIEGEVLAVVGESGSGKSVLTKTFTGMLESNGRIASGSISYRGQEL
AGLKDHKEWAGIRGAKIATIFQDPMTSLDPIKSIGSQITEVIIKHQGKSKAEAKKMAISYMESVGIPEAEKRFKEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIKLLKDLQAEYSFTTIFITHDLGVVASIADKVAVMYAGDIVE
YGTVEDIFYDPRHPYTWSLLSSLPQLADETGVLFSIPGAPPSLYKPIKGDAFAPRSRYAMQIDFEEDAPKFAVTETHWAK
TWLLHPDAPKVEKPEAIQNLHEKISEKFN

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=810982 P7F70_RS01490 WP_115129656.1 280268..281317(+) (amiE) [Streptococcus pluranimalium strain SP28]
ATGAAAAAAACAGATAATATTATTTTAAGTGCAAAAGATGTTGTTGTTGAATTCGATGTCCGTGACCGTGTTCTGACAGC
TATTCGAGGTGTTTCCCTTGATTTGATTGAAGGTGAAGTTCTAGCGGTAGTTGGAGAGTCAGGCTCTGGTAAATCCGTTT
TAACAAAGACTTTTACAGGAATGCTTGAAAGTAATGGTCGAATAGCCAGTGGTTCGATTTCTTATAGAGGACAAGAATTA
GCTGGATTAAAAGACCATAAAGAATGGGCAGGAATTCGTGGGGCTAAGATTGCAACGATTTTCCAAGATCCAATGACTTC
CTTAGATCCAATTAAATCAATAGGAAGTCAGATAACAGAAGTTATCATCAAGCATCAAGGAAAATCTAAAGCAGAAGCTA
AAAAAATGGCGATTTCATATATGGAAAGTGTAGGTATTCCAGAAGCAGAGAAACGTTTCAAAGAGTATCCTTTCCAATAT
TCTGGAGGAATGCGACAACGTATCGTTATTGCTATTGCCCTTGCATGTCGACCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCCTTGGATGTTACTATTCAAGCTCAGATCATCAAATTGTTGAAAGATTTACAAGCAGAATATAGCTTTACAACGA
TCTTTATCACTCACGATTTGGGTGTTGTTGCAAGCATTGCCGATAAAGTTGCAGTGATGTATGCAGGTGATATTGTTGAA
TATGGAACGGTCGAAGATATTTTCTATGACCCACGCCATCCATACACATGGAGCTTGTTATCAAGCTTGCCACAGCTAGC
AGATGAAACGGGAGTGTTGTTTTCTATTCCAGGAGCACCGCCATCATTATACAAACCTATAAAAGGCGATGCTTTTGCAC
CAAGATCACGCTATGCTATGCAAATTGATTTTGAAGAAGATGCGCCAAAATTTGCAGTTACAGAAACACACTGGGCAAAA
ACTTGGCTCTTGCATCCGGATGCACCAAAAGTTGAAAAACCAGAAGCTATTCAAAATCTACACGAAAAAATTTCAGAAAA
ATTCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A345VHP8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

82.558

98.567

0.814

  amiE Streptococcus thermophilus LMG 18311

80.814

98.567

0.797

  amiE Streptococcus thermophilus LMD-9

80.814

98.567

0.797

  oppD Streptococcus mutans UA159

55.655

96.275

0.536