Detailed information NTG0808502

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: RMQ62_RS05010
• Genome accession: NZ_CP135065
• Coordinates: 1054424..1054831 (-)
• Length: 135 a.a.
• NCBI ID: WP_074391329.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID24665
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1049424..1059831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ62_RS04980 (RMQ62_04980)	-	1050235..1050786 (-)	552	WP_044680793.1	folate family ECF transporter S component	-
RMQ62_RS04985 (RMQ62_04985)	-	1051103..1052290 (-)	1188	WP_044680792.1	acetate kinase	-
RMQ62_RS04990 (RMQ62_04990)	comGH	1052340..1053293 (-)	954	WP_024401509.1	class I SAM-dependent methyltransferase	Machinery gene
RMQ62_RS04995 (RMQ62_04995)	comGG	1053350..1053760 (-)	411	WP_024401508.1	competence type IV pilus minor pilin ComGG	-
RMQ62_RS05000 (RMQ62_05000)	comGF/cglF	1053738..1054172 (-)	435	WP_024389483.1	competence type IV pilus minor pilin ComGF	Machinery gene
RMQ62_RS05005 (RMQ62_05005)	comGE	1054159..1054452 (-)	294	WP_024401507.1	competence type IV pilus minor pilin ComGE	Machinery gene
RMQ62_RS05010 (RMQ62_05010)	comGD/cglD	1054424..1054831 (-)	408	WP_074391329.1	competence type IV pilus minor pilin ComGD	Machinery gene
RMQ62_RS05015 (RMQ62_05015)	comGC	1054812..1055093 (-)	282	WP_074391328.1	competence type IV pilus major pilin ComGC	Machinery gene
RMQ62_RS05020 (RMQ62_05020)	comGB	1055095..1056132 (-)	1038	WP_269472402.1	competence type IV pilus assembly protein ComGB	Machinery gene
RMQ62_RS05025 (RMQ62_05025)	comGA	1056044..1056994 (-)	951	WP_313741731.1	competence type IV pilus ATPase ComGA	Machinery gene
RMQ62_RS05030 (RMQ62_05030)	-	1057080..1058030 (+)	951	WP_313741732.1	LD-carboxypeptidase	-
RMQ62_RS05035 (RMQ62_05035)	-	1058065..1058430 (-)	366	WP_024395451.1	DUF1033 family protein	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15181.30 Da
• Isoelectric Point: 9.6759

>NTDB_id=808502 RMQ62_RS05010 WP_074391329.1 1054424..1054831(-) (comGD/cglD) [Streptococcus suis strain ID24665]
MLRRKNKAFTLFESLLTLFVVSFLAVSLSGTVQTAFQSVQEEIFLWEFEGIYKDSQKLAASSHQTVSLAIGGQEVTNGYQ
AVQVPRNVEVLEGKTITFEENGGNSSLAKIRFRLSRKTVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=808502 RMQ62_RS05010 WP_074391329.1 1054424..1054831(-) (comGD/cglD) [Streptococcus suis strain ID24665]
ATGCTACGGCGAAAAAATAAGGCCTTCACCCTGTTTGAAAGTCTGCTGACCTTGTTTGTTGTCAGTTTTTTAGCTGTTTC
TTTATCAGGAACGGTGCAAACGGCCTTTCAGTCTGTTCAAGAAGAGATTTTTCTCTGGGAATTTGAGGGCATCTATAAAG
ACAGTCAGAAACTGGCAGCTAGTTCCCACCAAACAGTGAGTCTAGCTATCGGTGGACAGGAGGTTACCAATGGTTATCAG
GCTGTACAGGTACCCAGAAATGTAGAAGTATTGGAAGGGAAGACCATCACATTTGAAGAAAATGGTGGAAATTCTTCTCT
GGCCAAGATTCGTTTTCGGCTTAGTCGAAAGACAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae D39	48.062	95.556	0.459
comGD/cglD	Streptococcus pneumoniae Rx1	48.062	95.556	0.459
comGD/cglD	Streptococcus pneumoniae R6	48.062	95.556	0.459
comGD/cglD	Streptococcus pneumoniae TIGR4	48.062	95.556	0.459
comGD/cglD	Streptococcus mitis NCTC 12261	47.287	95.556	0.452
comGD/cglD	Streptococcus mitis SK321	47.287	95.556	0.452
comGD	Streptococcus mutans UA140	47.287	95.556	0.452
comGD	Streptococcus mutans UA159	47.287	95.556	0.452
comGD	Streptococcus gordonii str. Challis substr. CH1	47.244	94.074	0.444
comGD	Lactococcus lactis subsp. cremoris KW2	38.281	94.815	0.363