Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP/pknB   Type   Regulator
Locus tag   RMQ62_RS03720 Genome accession   NZ_CP135065
Coordinates   774589..776583 (-) Length   664 a.a.
NCBI ID   WP_313741852.1    Uniprot ID   -
Organism   Streptococcus suis strain ID24665     
Function   activate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 769589..781583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ62_RS03695 (RMQ62_03695) - 770157..770528 (-) 372 WP_002937017.1 S1 RNA-binding domain-containing protein -
  RMQ62_RS03700 (RMQ62_03700) - 770530..771930 (-) 1401 WP_313680638.1 Cof-type HAD-IIB family hydrolase -
  RMQ62_RS03705 (RMQ62_03705) vraR 771980..772621 (-) 642 WP_024413700.1 response regulator transcription factor Regulator
  RMQ62_RS03710 (RMQ62_03710) - 772593..773609 (-) 1017 WP_002937028.1 sensor histidine kinase -
  RMQ62_RS03715 (RMQ62_03715) liaF 773606..774301 (-) 696 WP_012774984.1 cell wall-active antibiotics response protein LiaF -
  RMQ62_RS03720 (RMQ62_03720) stkP/pknB 774589..776583 (-) 1995 WP_313741852.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  RMQ62_RS03725 (RMQ62_03725) - 776583..777320 (-) 738 WP_004194145.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  RMQ62_RS03730 (RMQ62_03730) rsmB 777358..778671 (-) 1314 WP_313680636.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  RMQ62_RS03735 (RMQ62_03735) fmt 778658..779596 (-) 939 WP_024412758.1 methionyl-tRNA formyltransferase -

Sequence

Protein


Download         Length: 664 a.a.        Molecular weight: 71437.01 Da        Isoelectric Point: 6.0732

>NTDB_id=808488 RMQ62_RS03720 WP_313741852.1 774589..776583(-) (stkP/pknB) [Streptococcus suis strain ID24665]
MIQIGKIFAGRYRIVRQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDQIAIQRFQREARAMAELDHPNIVRISDIG
EEDGQQYLAMEYVNGLDLKRYIKENAPLSNEVAVRIMGQILLAMRMAHTRGIVHRDLKPQNVLLTSNGVAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIILFEMLTGRIPYDGDSAVTIALQHFQKPLPSVREENANVP
QALENVVLKATAKKLNERYKSVAEMYADLASALSMDRRNEPRVELEGNKVDTKTLPKLSQANVETKVPHTNSSAQVSATD
KGPGKKEVAKSGNKPVSKPRSGMRTRYKVLIGAILLTVIAAGLIFFNTPRTVTVPDVSGQTVEKATEMIEVAGLEVGNIT
EEATATVDEGLVIRTSPAAKTTRRQGSKIDIVVATAAMVSIPEVTDKDSDTARQELEALGFQVTIKEEYSEKVAQGLVIK
TDPGANSSAEKGAKITLYISKGVAPEVVPNVVGKTQENATQILQTAGFSIGTITQEYSSSVTAGQVISTDPVVNTELTKG
SIINLVVSKGKELIMPDLTSGNYTYSQARSQLQALGVNVESIEKQEDRSYYSTTSDIVIGQYPAAGATIDGTVTLYVSVA
STGTSSDSSTGSSTSTSTSTDSGQ

Nucleotide


Download         Length: 1995 bp        

>NTDB_id=808488 RMQ62_RS03720 WP_313741852.1 774589..776583(-) (stkP/pknB) [Streptococcus suis strain ID24665]
ATGATTCAAATCGGTAAGATCTTTGCCGGTCGGTATCGAATCGTTCGGCAAATTGGTCGAGGCGGTATGGCAGATGTTTA
CCTAGCAAGAGATTTGATTTTAGATGGAGAAGAGGTTGCTGTTAAAGTTCTTCGGACCAACTATCAGACAGATCAAATTG
CTATCCAGCGTTTTCAACGTGAAGCGCGTGCCATGGCAGAACTTGACCATCCCAATATCGTTCGTATTTCGGACATCGGC
GAAGAAGATGGTCAACAGTATCTGGCTATGGAATATGTCAATGGCCTCGATTTAAAACGTTATATAAAAGAAAATGCACC
ACTCTCCAACGAAGTTGCGGTGCGAATTATGGGACAGATTCTCCTTGCTATGCGAATGGCGCACACGAGAGGAATTGTCC
ATCGAGATTTGAAACCTCAGAACGTCCTTTTGACTTCCAATGGAGTCGCTAAAGTAACAGACTTTGGTATTGCAGTTGCC
TTTGCTGAAACGAGTTTGACACAAACCAACTCCATGTTGGGTTCTGTTCACTATCTTTCACCTGAGCAGGCGCGTGGTTC
GAAAGCGACCATTCAAAGTGACATTTATGCGATGGGAATCATCCTTTTTGAAATGTTGACGGGTCGCATTCCCTATGATG
GAGACAGTGCTGTGACGATCGCTCTTCAGCATTTCCAAAAACCTCTTCCATCGGTTAGAGAAGAGAATGCCAACGTACCT
CAGGCCTTAGAAAATGTTGTACTAAAAGCAACGGCAAAAAAATTAAACGAGCGCTATAAGTCGGTTGCAGAAATGTACGC
AGATTTAGCTTCGGCTCTATCCATGGATCGTCGGAATGAACCCAGGGTTGAACTAGAAGGGAACAAGGTTGATACAAAAA
CCTTGCCGAAACTCTCCCAAGCCAATGTTGAAACGAAAGTACCGCATACAAACAGTTCTGCCCAAGTTTCTGCGACGGAT
AAGGGGCCTGGTAAGAAAGAAGTGGCGAAGTCGGGAAATAAGCCTGTTTCAAAACCAAGGTCAGGTATGCGTACACGCTA
CAAAGTCTTGATAGGGGCTATTTTGTTAACAGTCATAGCGGCTGGACTCATATTTTTCAACACTCCACGAACAGTTACCG
TTCCTGATGTATCTGGTCAAACCGTTGAAAAAGCTACTGAAATGATTGAAGTGGCAGGATTGGAAGTTGGAAACATCACA
GAAGAAGCGACAGCGACTGTAGATGAAGGCTTGGTAATACGGACCTCTCCGGCTGCAAAGACGACCAGACGTCAAGGAAG
TAAGATTGATATTGTAGTAGCAACGGCTGCGATGGTATCTATTCCAGAGGTGACAGATAAGGATTCTGATACTGCACGGC
AGGAATTGGAGGCTCTTGGTTTCCAAGTGACAATAAAAGAAGAATATAGCGAAAAAGTTGCCCAAGGTCTCGTTATCAAA
ACAGATCCAGGAGCAAATAGTTCTGCTGAGAAGGGGGCAAAAATTACCCTTTACATTTCCAAAGGAGTAGCGCCAGAAGT
TGTTCCAAACGTTGTTGGAAAAACTCAGGAGAATGCTACTCAAATTCTTCAGACAGCAGGCTTCAGTATTGGAACTATTA
CTCAGGAATATAGCTCATCTGTTACTGCGGGTCAGGTTATCAGTACAGATCCCGTTGTCAATACAGAGTTGACAAAAGGT
TCTATCATCAATCTAGTTGTTTCAAAAGGAAAAGAATTGATTATGCCTGATTTAACATCTGGCAATTACACCTATTCACA
GGCACGTAGTCAATTACAAGCACTGGGTGTCAATGTGGAAAGTATTGAAAAACAAGAAGATAGAAGCTATTATTCAACGA
CAAGTGACATCGTCATTGGACAATATCCTGCTGCTGGCGCAACAATTGATGGAACAGTTACCTTGTATGTCTCCGTTGCA
TCAACCGGCACCAGTAGCGATTCCTCAACAGGAAGCTCCACTAGCACAAGTACTTCGACAGATAGCGGACAATAA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(12-240)

PASTA domain (PASTA)

(372-434)

PASTA domain (PASTA)

(507-569)

PASTA domain (PASTA)

(440-501)

PASTA domain (PASTA)

(574-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP/pknB Streptococcus salivarius strain HSISS4

54.025

84.187

0.455
  stkP Streptococcus pneumoniae TIGR4

68.493

65.964

0.452
  stkP Streptococcus pneumoniae D39

68.265

65.964

0.45
  stkP Streptococcus pneumoniae R6

68.265

65.964

0.45
  stkP Streptococcus pneumoniae Rx1

68.037

65.964

0.449
  pknB Streptococcus mutans UA159

54.579

80.572

0.44