Detailed information NTG0807771

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: P5655_RS17355
• Genome accession: NZ_CP120681
• Coordinates: 3210766..3211911 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DSM 10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3205766..3216911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5655_RS17335 (P5655_17335)	albF	3205782..3207062 (+)	1281	WP_003242974.1	pitrilysin family protein	-
P5655_RS17340 (P5655_17340)	albG	3207059..3207760 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
P5655_RS17345 (P5655_17345)	ywhL	3207766..3209142 (-)	1377	WP_003244415.1	YncE family protein	-
P5655_RS17350 (P5655_17350)	ywhK	3209181..3210536 (-)	1356	WP_003227552.1	YncE family protein	-
P5655_RS22665	-	3210533..3210763 (-)	231	WP_009968328.1	hypothetical protein	-
P5655_RS17355 (P5655_17355)	rapF	3210766..3211911 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
P5655_RS17360 (P5655_17360)	phrF	3211895..3212014 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
P5655_RS17365 (P5655_17365)	ywhH	3212113..3212586 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
P5655_RS17370 (P5655_17370)	speB	3212618..3213490 (-)	873	WP_003227545.1	agmatinase	-
P5655_RS17375 (P5655_17375)	speE	3213551..3214381 (-)	831	WP_003227543.1	spermidine synthase	-
P5655_RS17380 (P5655_17380)	pbpG	3214583..3216658 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=807771 P5655_RS17355 WP_003227549.1 3210766..3211911(+) (rapF) [Bacillus subtilis strain DSM 10]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=807771 P5655_RS17355 WP_003227549.1 3210766..3211911(+) (rapF) [Bacillus subtilis strain DSM 10]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572