Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P5649_RS09750 Genome accession   NZ_CP120613
Coordinates   1900464..1902773 (+) Length   769 a.a.
NCBI ID   WP_032723438.1    Uniprot ID   -
Organism   Bacillus subtilis strain DSM 23521     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1895464..1907773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS09720 (P5649_09720) pdeH 1897036..1898265 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  P5649_RS09725 (P5649_09725) - 1898241..1898609 (-) 369 WP_003243784.1 hypothetical protein -
  P5649_RS09730 (P5649_09730) - 1898723..1898848 (-) 126 WP_003228793.1 hypothetical protein -
  P5649_RS09735 (P5649_09735) degQ 1899070..1899210 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  P5649_RS09740 (P5649_09740) comQ 1899395..1900294 (+) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  P5649_RS09745 (P5649_09745) comX 1900282..1900449 (+) 168 WP_003242801.1 competence pheromone ComX Regulator
  P5649_RS09750 (P5649_09750) comP 1900464..1902773 (+) 2310 WP_032723438.1 two-component system sensor histidine kinase ComP Regulator
  P5649_RS09755 (P5649_09755) comA 1902854..1903498 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  P5649_RS09760 (P5649_09760) yuxO 1903517..1903897 (+) 381 WP_003228810.1 hotdog fold thioesterase -
  P5649_RS09765 (P5649_09765) mnhG 1903936..1904310 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  P5649_RS09770 (P5649_09770) mrpF 1904294..1904578 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  P5649_RS09775 (P5649_09775) mrpE 1904578..1905054 (-) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  P5649_RS09780 (P5649_09780) mrpD 1905060..1906541 (-) 1482 WP_003244432.1 Na+/H+ antiporter subunit D -
  P5649_RS09785 (P5649_09785) mrpC 1906534..1906875 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  P5649_RS09790 (P5649_09790) mrpB 1906875..1907306 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89236.71 Da        Isoelectric Point: 8.4502

>NTDB_id=806904 P5649_RS09750 WP_032723438.1 1900464..1902773(+) (comP) [Bacillus subtilis strain DSM 23521]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKIHKNDKSQFMIEEISESSYGQFVGLRQGDIILKINKEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLFFYFLSIICIFYILKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQRYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATLN
LVSFATLTLFSFSAIYLHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMDIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEVGPDWNFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRGTCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=806904 P5649_RS09750 WP_032723438.1 1900464..1902773(+) (comP) [Bacillus subtilis strain DSM 23521]
TTGAAGAACTTAATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTTTATATAAGCTATACAACTTATATCAG
TATGAATGGAATTATTATTGGGACTAAGATTCATAAAAATGATAAAAGTCAATTTATGATAGAAGAAATATCGGAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGACATCATATTAAAAATTAATAAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGTTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAAGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGCGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAAGATACCTTGGAGAAATAGGTAAAACTTTTTTGAATAGAATTTCTTTTCTTTATA
TCATACCAATATTTAATCTTGGTATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCAACTCTTAAT
TTGGTTTCTTTTGCAACTTTGACTCTATTTTCTTTTTCAGCGATATACTTACATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTCTTTCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAGTTGGACCGGACTGGAATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATTGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGCGGTAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCCCGGCTAACACGTGATGAAATATCGTGGCTGAAAACACTGTCTTTTTATACAAGTGTGTCCATGGAAAATGTCC
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGGGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGC
GTTGGGTTTGATCAAGAAAAAAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

99.87

100

0.999