Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RGC87_RS04460 Genome accession   NZ_CP133660
Coordinates   866823..867641 (+) Length   272 a.a.
NCBI ID   WP_309480388.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JH4322     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 861823..872641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGC87_RS04435 (RGC87_04435) - 862442..862972 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  RGC87_RS04440 (RGC87_04440) yfkAB 863232..864383 (-) 1152 WP_309480387.1 radical SAM/CxCxxxxC motif protein YfkAB -
  RGC87_RS04445 (RGC87_04445) - 864607..864768 (+) 162 WP_001005407.1 SE1561 family protein -
  RGC87_RS04450 (RGC87_04450) - 864899..865414 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  RGC87_RS04455 (RGC87_04455) sgtB 865753..866562 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RGC87_RS04460 (RGC87_04460) recX 866823..867641 (+) 819 WP_309480388.1 recombination regulator RecX Regulator
  RGC87_RS04465 (RGC87_04465) - 867619..867933 (+) 315 WP_000435806.1 YfhH family protein -
  RGC87_RS04470 (RGC87_04470) - 867948..869465 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  RGC87_RS04475 (RGC87_04475) - 869474..870310 (+) 837 WP_000886456.1 hypothetical protein -
  RGC87_RS04480 (RGC87_04480) - 870571..871548 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32305.17 Da        Isoelectric Point: 5.9211

>NTDB_id=799994 RGC87_RS04460 WP_309480388.1 866823..867641(+) (recX) [Staphylococcus aureus strain JH4322]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQFLIQKGFEMETIHAVLNEMDFTQDEGVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=799994 RGC87_RS04460 WP_309480388.1 866823..867641(+) (recX) [Staphylococcus aureus strain JH4322]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAGAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATTTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGGGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989