Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RDV54_RS01445 Genome accession   NZ_CP133471
Coordinates   277159..277896 (+) Length   245 a.a.
NCBI ID   WP_000782682.1    Uniprot ID   -
Organism   Streptococcus mitis strain LMG 14557     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 272159..282896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV54_RS01425 (RDV54_01425) - 272349..273452 (+) 1104 WP_000225887.1 glycosyltransferase -
  RDV54_RS01430 (RDV54_01430) - 273454..274440 (+) 987 WP_000446965.1 glycosyltransferase family 2 protein -
  RDV54_RS01435 (RDV54_01435) - 274456..275925 (+) 1470 WP_004238693.1 O-antigen polysaccharide polymerase Wzy family protein -
  RDV54_RS01440 (RDV54_01440) - 275918..276952 (+) 1035 WP_000461491.1 hypothetical protein -
  RDV54_RS01445 (RDV54_01445) mecA 277159..277896 (+) 738 WP_000782682.1 adaptor protein MecA Regulator
  RDV54_RS01450 (RDV54_01450) - 278048..279334 (+) 1287 WP_000216346.1 homoserine dehydrogenase -
  RDV54_RS01455 (RDV54_01455) thrB 279336..280205 (+) 870 WP_000692425.1 homoserine kinase -
  RDV54_RS01460 (RDV54_01460) msrB 280418..281356 (+) 939 WP_000818182.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence

Protein


Download         Length: 245 a.a.        Molecular weight: 28406.18 Da        Isoelectric Point: 4.0236

>NTDB_id=799409 RDV54_RS01445 WP_000782682.1 277159..277896(+) (mecA) [Streptococcus mitis strain LMG 14557]
MKMKQISDTTLKITMSLEDLMDRGMEIADFLVPQEKTEEFFYAILDELEMPDSFLDTGMLSFRVTPKPDKVDVFVTKSKI
DQNLDFEDLSDLPDMEELAQMSPDEFIKTLEKSIADKTKDDIEAIQSLEQVEAKEEEQEQAEQEGESKKEPYIYYILSFS
KLADLVAFAKTVTFEMETSELYKMNERYYLTILVDIENHPSPYPAWLLARMREFAEDSDISRSVLQEYGQVLLNHDAVLN
LQKIG

Nucleotide


Download         Length: 738 bp        

>NTDB_id=799409 RDV54_RS01445 WP_000782682.1 277159..277896(+) (mecA) [Streptococcus mitis strain LMG 14557]
ATGAAAATGAAACAAATCAGTGATACAACTTTAAAAATCACGATGTCTTTAGAGGATTTGATGGATCGAGGAATGGAGAT
TGCTGACTTTCTCGTTCCTCAAGAAAAAACAGAAGAGTTCTTTTATGCTATCTTGGATGAGTTAGAGATGCCTGATAGCT
TCCTAGATACAGGTATGTTGAGCTTCCGTGTGACTCCAAAACCTGATAAGGTAGATGTCTTTGTAACCAAATCAAAGATT
GATCAAAATCTAGATTTTGAAGATTTATCGGATTTACCAGATATGGAAGAATTGGCTCAAATGTCTCCAGATGAATTTAT
CAAAACCTTGGAAAAAAGCATCGCAGACAAAACCAAGGATGATATCGAAGCGATTCAATCTCTAGAGCAGGTTGAAGCCA
AGGAGGAAGAGCAAGAGCAGGCTGAACAAGAAGGTGAAAGCAAGAAAGAGCCGTACATCTATTACATCCTTTCTTTTTCT
AAGTTAGCTGACTTGGTGGCTTTTGCCAAGACAGTGACTTTTGAGATGGAAACTTCTGAACTCTACAAGATGAATGAGCG
CTATTATTTGACCATTTTAGTGGATATTGAAAATCATCCAAGTCCATATCCAGCTTGGCTCTTGGCCCGTATGCGCGAGT
TTGCGGAAGATAGTGATATCAGTCGTTCAGTCTTGCAAGAGTATGGCCAAGTCTTGCTGAATCACGATGCAGTGCTCAAT
CTGCAAAAGATTGGATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-239)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

97.551

100

0.976
  mecA Streptococcus pneumoniae D39

97.551

100

0.976
  mecA Streptococcus pneumoniae R6

97.551

100

0.976
  mecA Streptococcus pneumoniae TIGR4

97.143

100

0.971
  mecA Streptococcus mutans UA159

49.187

100

0.494
  mecA Streptococcus thermophilus LMD-9

46.586

100

0.473
  mecA Streptococcus thermophilus LMG 18311

46.185

100

0.469