Detailed information NTG0797487

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: PZB78_RS10535
• Genome accession: NZ_CP119073
• Coordinates: 2052909..2053526 (-)
• Length: 205 a.a.
• NCBI ID: WP_151175157.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain SW207
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2047909..2058526

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PZB78_RS10505 (PZB78_10470)	rpsT	2048212..2048478 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
PZB78_RS10510 (PZB78_10475)	holA	2048493..2049536 (-)	1044	WP_151175155.1	DNA polymerase III subunit delta	-
PZB78_RS10515 (PZB78_10480)	-	2049576..2049725 (-)	150	WP_151175156.1	hypothetical protein	-
PZB78_RS10520 (PZB78_10485)	-	2049766..2049900 (+)	135	WP_010335005.1	YqzM family protein	-
PZB78_RS10525 (PZB78_10490)	comEC	2049939..2052269 (-)	2331	WP_286109244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PZB78_RS10530 (PZB78_10495)	-	2052273..2052842 (-)	570	WP_010335007.1	ComE operon protein 2	-
PZB78_RS10535 (PZB78_10500)	comEA	2052909..2053526 (-)	618	WP_151175157.1	helix-hairpin-helix domain-containing protein	Machinery gene
PZB78_RS10540 (PZB78_10505)	comER	2053610..2054431 (+)	822	WP_101864554.1	late competence protein ComER	-
PZB78_RS10545 (PZB78_10510)	-	2054496..2055239 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
PZB78_RS10550 (PZB78_10515)	rsfS	2055236..2055592 (-)	357	WP_044154484.1	ribosome silencing factor	-
PZB78_RS10555 (PZB78_10520)	yqeK	2055610..2056170 (-)	561	WP_106020125.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
PZB78_RS10560 (PZB78_10525)	-	2056160..2056729 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
PZB78_RS10565 (PZB78_10530)	yhbY	2056740..2057030 (-)	291	WP_106020126.1	ribosome assembly RNA-binding protein YhbY	-
PZB78_RS10570 (PZB78_10535)	aroE	2057030..2057866 (-)	837	WP_106022105.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22045.89 Da
• Isoelectric Point: 4.8695

>NTDB_id=797487 PZB78_RS10535 WP_151175157.1 2052909..2053526(-) (comEA) [Bacillus halotolerans strain SW207]
MNWLNQHKTIIMSVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKENEEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=797487 PZB78_RS10535 WP_151175157.1 2052909..2053526(-) (comEA) [Bacillus halotolerans strain SW207]
TTGAATTGGTTGAATCAACATAAAACGATAATCATGTCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGAGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATCGATATAAAAGGCGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCACAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAATACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGACCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (64-119)

• Helix-hairpin-helix motif (HHH_3) (141-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Staphylococcus aureus N315	37.387	100	0.405
comEA	Streptococcus thermophilus LMD-9	37.264	100	0.385
comEA	Latilactobacillus sakei subsp. sakei 23K	35.78	100	0.38