Detailed information NTG0797485

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: PZB78_RS10525
• Genome accession: NZ_CP119073
• Coordinates: 2049939..2052269 (-)
• Length: 776 a.a.
• NCBI ID: WP_286109244.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain SW207
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2044939..2057269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PZB78_RS10490 (PZB78_10455)	-	2045279..2045617 (-)	339	WP_101864551.1	YqxA family protein	-
PZB78_RS10495 (PZB78_10460)	spoIIP	2045634..2046839 (-)	1206	WP_044154491.1	spore autolysin SpoIIP	-
PZB78_RS10500 (PZB78_10465)	gpr	2046902..2048008 (-)	1107	WP_044154490.1	GPR endopeptidase	-
PZB78_RS10505 (PZB78_10470)	rpsT	2048212..2048478 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
PZB78_RS10510 (PZB78_10475)	holA	2048493..2049536 (-)	1044	WP_151175155.1	DNA polymerase III subunit delta	-
PZB78_RS10515 (PZB78_10480)	-	2049576..2049725 (-)	150	WP_151175156.1	hypothetical protein	-
PZB78_RS10520 (PZB78_10485)	-	2049766..2049900 (+)	135	WP_010335005.1	YqzM family protein	-
PZB78_RS10525 (PZB78_10490)	comEC	2049939..2052269 (-)	2331	WP_286109244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PZB78_RS10530 (PZB78_10495)	-	2052273..2052842 (-)	570	WP_010335007.1	ComE operon protein 2	-
PZB78_RS10535 (PZB78_10500)	comEA	2052909..2053526 (-)	618	WP_151175157.1	helix-hairpin-helix domain-containing protein	Machinery gene
PZB78_RS10540 (PZB78_10505)	comER	2053610..2054431 (+)	822	WP_101864554.1	late competence protein ComER	-
PZB78_RS10545 (PZB78_10510)	-	2054496..2055239 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
PZB78_RS10550 (PZB78_10515)	rsfS	2055236..2055592 (-)	357	WP_044154484.1	ribosome silencing factor	-
PZB78_RS10555 (PZB78_10520)	yqeK	2055610..2056170 (-)	561	WP_106020125.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
PZB78_RS10560 (PZB78_10525)	-	2056160..2056729 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
PZB78_RS10565 (PZB78_10530)	yhbY	2056740..2057030 (-)	291	WP_106020126.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86170.32 Da
• Isoelectric Point: 8.2228

>NTDB_id=797485 PZB78_RS10525 WP_286109244.1 2049939..2052269(-) (comEC) [Bacillus halotolerans strain SW207]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLSLLIVSTKTRHAPLIFVCLFSFVLNFALFKITDSQNTSSYQQGSYHF
KAVIHSIPKIDGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGTLEKPKQATVPGTFDYQQYLYRQRI
HWSYSVTSIGNCSEPSGVRYKLLSLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGLHI
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHIKTSLGQLTIVSVIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCILPAA
IIGVILLFFSTSVGQFLFYWFDVMMTWINRLITKIADIEIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFPRLTVSTG
LFCATLILLFVSPYVSSEGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSESHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGRISWLLTGDLEKEGEQEVIDVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAGEN
NRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKSGSGTFSVYPPYDTSDMTETN

Nucleotide

• Length: 2331 bp

>NTDB_id=797485 PZB78_RS10525 WP_286109244.1 2049939..2052269(-) (comEC) [Bacillus halotolerans strain SW207]
ATGCGGAATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTCTCTTCTTATTGTGTCAACCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTTTATTCT
CTTTTGTACTCAATTTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGGCAGCTATCACTTC
AAGGCGGTTATTCATAGTATTCCTAAAATTGACGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
CTGGTACTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTACCGGCAGCGTATT
CATTGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGGTGTCCGGTATAAGCTTCTCAGTTTGAGAAA
ATACATCGTATCATTCACGAACACACAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTGAAAGAT
CTTATTTAGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTCCATATC
GGGATTTTGACAGCAGGCCTATTTTATGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTATTGCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCTTCTGTTCTCCGAGCCGCTCTGATGTCCGGCATCTACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCGTCTATTTTTCAGCA
TATCAAAACGAGTCTGGGACAGCTGACGATTGTATCTGTTATTGCCCAGCTAGGCTCACTACCCATTCTTCTGTATCATT
TTCAGCAGTTTTCTATCATTAGCATTCCAATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
ATTATAGGAGTTATTCTATTATTTTTTTCAACGTCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GATCAACAGACTGATCACTAAAATCGCTGATATAGAAATATTCACAATCATCATCTCTCGCCCTGCACCTGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCCCCGGCTGACAGTGTCCACAGGC
CTTTTTTGTGCAACGCTTATCCTGCTCTTTGTTTCCCCTTATGTTAGTTCCGAGGGAGAAGTAGATATGATTGATATCGG
ACAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGTGTTTTAATTGATACGGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGGGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAACTTGATGCGCTGATACTGACGCACGCAGATCAAGATCATATCGGAGAGGCAGAGGTTTTGCTGAAGCATCA
TAAAGTGAAGCGTCTCATCATTCCGAAAGGGTTTGTTTCTGAATCTCATGATGAGAAAGTGCTGCGGACTGCCAGACAGG
AGGGTGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCACCGGAA
ACGCCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGATCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCGATGTGTTCCCAAATATAAAAGCGGATGTGTTAAAGGTGGGGCATC
ATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGTGAAAAC
AATAGGTACCATCATCCGCATCAAGAAGTTCTTCAATTGTTAAAGAGCCGATCCATTCGTGTGCTGCGCACTGATCAAAG
CGGCACGATCCAATACACGTACAAAAGCGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATATGACAG
AGACGAATTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	79.381	100	0.794