Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   RAM31_RS01580 Genome accession   NZ_CP132368
Coordinates   347112..347912 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain UNC_SA44     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 342112..352912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAM31_RS01565 (RAM31_01565) walK 342781..344607 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  RAM31_RS01570 (RAM31_01570) yycH 344600..345934 (+) 1335 WP_001060150.1 two-component system activity regulator YycH -
  RAM31_RS01575 (RAM31_01575) - 345935..346723 (+) 789 WP_001104167.1 two-component system regulatory protein YycI -
  RAM31_RS01580 (RAM31_01580) vicX 347112..347912 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  RAM31_RS01585 (RAM31_01585) adsA 348140..350458 (+) 2319 WP_000645781.1 LPXTG-anchored adenosine synthase AdsA -
  RAM31_RS01590 (RAM31_01590) rlmH 350826..351305 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RAM31_RS01595 (RAM31_01595) - 351521..352777 (+) 1257 WP_000566666.1 MrcB family domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=796419 RAM31_RS01580 WP_000088649.1 347112..347912(+) (vicX) [Staphylococcus aureus strain UNC_SA44]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=796419 RAM31_RS01580 WP_000088649.1 347112..347912(+) (vicX) [Staphylococcus aureus strain UNC_SA44]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474